Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00066 ATGGACTTGCAGCTGAAGCAATGGAAAAACCAGTATGAGTCAGAGCAACAACATTCTACAAAGAAACCAAAATTTCTACCTGAACCCCATCAACAGCCACAATCTCCTGCCTCTGCATTCCCTTTGTTTGTACCTGAAATCAACAGCAAAGTCAGCACCCTGTCATCCTTATCTGATTCAACCTTAGCTGCTGTTACCAGATTTCCCAGAATGGGGAGTTATTTCAGCTTTGCACAATGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGATACATGTTAGCTGGTGCTGCTGTTCCTCCTGAGCTTCTTCAACCCATCAAGAAAAGCACTCTTCCTTCCACTTCATATTTCCTCCAACACCCTCTTCAACACTATCACCCTCATTTGTTGCAATCAGGGTACTGGGGAAGAGGAGCCATGGATCCAGAGCCTGGCCGGTGCCGGAGGACCGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCGGGTCAGAAGTACTGCGAGCGCCACATGCATCGTGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCAATACCAACTAGTGCCACTGGTGCTGATGGTGGATCTCATTCTCTTGGTGCTACAACTTCCATTTCTTCACCCTCTATAGCAGCTTCCTCATTCAAATCCCCATTTGATCTCCTTCACCTCAATGAACGTTCCTCTGGGATTAAGAATGATAGCAAGAGCTTGTTTGAAAACAAAGATCATGTGGATGGGGATGACAGATCTAATGGCCATATCCTGAGGCATTTCTTTGATGATTGGCCTCGTGGTGAAAGCAATGCTGGCAGGATCAACTCATCAGTTACTTGCCTCTCTATTTCAACGCCTTCCTCTGATGTGTCATTGAAATTGTCCACTGGCTACAGAGAGGAACAATGCCCAAGAAATGAGAATGTGGAGGCACAGCAGCAACTGCAGTTGAACTGGGCGGAAGGGTGGAGATCAGCTACTCAATTGGCTTCCATGGGAGGACCACTTGCAGAGGCATTGAGATCATCCACCCCAACTTCATCACAAACAAGTGTACTTCTTCAATTGCCTCTTAGTTCTGCATCTGAACTAGCTTCCTTAGCGCCTAGATTTGGTTAA 1125 0.4729 MDLQLKQWKNQYESEQQHSTKKPKFLPEPHQQPQSPASAFPLFVPEINSKVSTLSSLSDSTLAAVTRFPRMGSYFSFAQWQELELQALIFRYMLAGAAVPPELLQPIKKSTLPSTSYFLQHPLQHYHPHLLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPIPTSATGADGGSHSLGATTSISSPSIAASSFKSPFDLLHLNERSSGIKNDSKSLFENKDHVDGDDRSNGHILRHFFDDWPRGESNAGRINSSVTCLSISTPSSDVSLKLSTGYREEQCPRNENVEAQQQLQLNWAEGWRSATQLASMGGPLAEALRSSTPTSSQTSVLLQLPLSSASELASLAPRFG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00066 374 PANTHER GROWTH-REGULATING FACTOR 5 32 290 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sebi128g00066 374 Pfam WRC 143 185 IPR014977 -
Sebi128g00066 374 ProSiteProfiles WRC domain profile. 142 186 IPR014977 -
Sebi128g00066 374 MobiDBLite consensus disorder prediction 175 204 - -
Sebi128g00066 374 MobiDBLite consensus disorder prediction 1 38 - -
Sebi128g00066 374 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi128g00066 374 Pfam QLQ 75 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi128g00066 374 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00066 Sebi-Chr128 1149399 1151380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00066 1 362 GRF Transcription Factor Family AT3G52910 50.131 7.93e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sebi128g00066 WRC 2.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00066 - - gmx:100814842 463.381