Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00056 ATGAAGATGATAATAGAATGGTGTGTCTCTGCAAGTTCAACACGTGTCTGTGCCCCTCTCCCTTACACTAACTATCCTTGTGAAGTTCCCACAGATGGGGACCAGGTTGCAATTCACTACTATGGTAGGCTGGCAGCAAAACAAGGATGGCGTTTTGACTCAACTTATGACCACAAAGATGAGAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGGACTGGCAAGGTTATTGCTGGAATTGAGGTGGCAGTAAGATCAATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATCAAAACACATCTCAGGAGCCCATCCCACCAAATCCTGAGGCATCAGTGAAGTCAGCGTACATGATCCAGCCACCTAGAAAACATAAGGCATATGCATGA 411 0.4501 MKMIIEWCVSASSTRVCAPLPYTNYPCEVPTDGDQVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGTGKVIAGIEVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNPEASVKSAYMIQPPRKHKAYA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00056 136 Gene3D - 24 120 IPR046357 GO:0003755
Sebi128g00056 136 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 29 115 IPR001179 GO:0003755
Sebi128g00056 136 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 33 115 IPR001179 GO:0003755
Sebi128g00056 136 SUPERFAMILY FKBP-like 26 116 - -
Sebi128g00056 136 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 28 115 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00056 Sebi-Chr128 929379 931529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00056 28 115 Calmodulin-binding Proteins AT5G48570 40.449 1.40e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00056 - - gmx:100808927 179.874