Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00052 ATGAACCCGAACGATGAAAACTCTCCGAAATTTTCATCAGCTATAGACTCCTTCGATTCGACGGAGTTTGGTGCTGTGCCGGTGCCGGTGACGGTGCCTCTGGAGTGTTTACAAGGGAACCCTGTTCCGCCATTTTTGTCTAAGACCTTCGACCTGGTCGATGACCCGTCTCTGGATTCGATTATATCGTGGGGCTCCAACGGTGTTAGCTTCGTGGTGTGGGACCCTTTGGAGTTTGCGAGGCTCGTCTTGCCACGACATTTCAAGCACAACAATTTCTCCAGTTTTGTTCGACAGCTTAATACTTATGTGGGTATATTGCTTTGCTTTCACGCAGCTTCTAATGGCTCCTGCCATCTCTTTGGATTCCGCAAGATTGACACGGACAAGTGGGAGTTCTTTAATGAAGCTTTCCAGAGAGGGAAGAAGCACTTATTGAAGAACATTCAAAGGCGCAGGTCATCTCAGCAAGTTGGTAACTATGTTGGATCTTCTTCTGATGCAGGGAAGTCTGGAGTTGAGGTTGAGATAGAAAAACTGAGGAAGGACAGGAGTATGTTAATGCAAGAAGTGATTGATTTGCAGCAACAACAGCGAAGAACGGTTCACCATGCAGGTGAAGTGAATCAAAGGCTCCAATCCGCAGAGCAGAGGCAGAAACAAATGGTTTCCTTCTTGGCAAAGTTATTTCAAAACCCAGAATTTTTAGCTCGCCTTAAGCAGAAGAAGGAACAGAGGGATATAGATTCTCCAAGAGTGAAAAGGAAGTTTGTTAAGCAGCACCAACATGAAACAGGAACATCAGAAACTCTCAGAGAAGGGCAGATATTGAGGTACCAACCTGATTGGAGAAATATAACCATGTCTTCTGAAACTCCAGAACTAATTCCAGTTTCTATTGAACAGACTCCTCACTACCTTTCACAGGATTTGGCAAGTGAAATGAATGTAGATGCAGAAGATCTGGCTCCTCAAATTGAGAATATTGTATCAGATGAATTGGCTGCAATGCATGGGGTTATGCCATCTATGCCAACTCCAGAAATCATTGGAGAAGGATCATCTAGCTTTGGACTTGAAGATCCCTTTTACAAAGGGAAAAATGTCATGAGCCCAAATCAAGAAGTTCTTCCTGAGTATTTTAGTTCCTTCCCTGAGGTTTTGACCAAGGATAAAGGCTTTCCAGAGTTTTCACCTCTTGGAACAGAAAGCATTATCAAGCAAGAAGATATATGGGACCCAGACTTCAATGTTAGTATTGCTGCTTCAAGCAGTGGGAATGAGCTGTGGGGAAATCCTATGAATTATGGAGTTCCAGAATTTGGAGTCACAAGTGGCATGTCTGAGTCAGACATCTGGGATATTGGCTTAGGAAATTTGGGCATTGATACGTGGCCAGCTGATGAATCTCCTCTTGATGAAACAAATAGTCAAGCTGGTCAGCCAAAAGATGATAGACATAAGAAGTAA 1470 0.4361 MNPNDENSPKFSSAIDSFDSTEFGAVPVPVTVPLECLQGNPVPPFLSKTFDLVDDPSLDSIISWGSNGVSFVVWDPLEFARLVLPRHFKHNNFSSFVRQLNTYVGILLCFHAASNGSCHLFGFRKIDTDKWEFFNEAFQRGKKHLLKNIQRRRSSQQVGNYVGSSSDAGKSGVEVEIEKLRKDRSMLMQEVIDLQQQQRRTVHHAGEVNQRLQSAEQRQKQMVSFLAKLFQNPEFLARLKQKKEQRDIDSPRVKRKFVKQHQHETGTSETLREGQILRYQPDWRNITMSSETPELIPVSIEQTPHYLSQDLASEMNVDAEDLAPQIENIVSDELAAMHGVMPSMPTPEIIGEGSSSFGLEDPFYKGKNVMSPNQEVLPEYFSSFPEVLTKDKGFPEFSPLGTESIIKQEDIWDPDFNVSIAASSSGNELWGNPMNYGVPEFGVTSGMSESDIWDIGLGNLGIDTWPADESPLDETNSQAGQPKDDRHKK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00052 489 Pfam HSF-type DNA-binding 45 152 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi128g00052 489 SUPERFAMILY "Winged helix" DNA-binding domain 40 152 IPR036390 -
Sebi128g00052 489 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi128g00052 489 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi128g00052 489 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi128g00052 489 FunFam Heat stress transcription factor B-4 37 153 - -
Sebi128g00052 489 Gene3D - 38 153 IPR036388 -
Sebi128g00052 489 Coils Coil 170 197 - -
Sebi128g00052 489 SMART hsfneu3 41 152 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sebi128g00052 489 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 34 278 IPR027725 -
Sebi128g00052 489 MobiDBLite consensus disorder prediction 464 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00052 Sebi-Chr128 891095 893409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00052 21 474 HSF AT5G03720 41.895 1.34e-101 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sebi128g00052 HSF_DNA-bind 3.8e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00052 K09419 - gmx:100780835 660.218