Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00051 ATGCCTGCGAGAAGATCCAACTACTCGCTTCTTAGCCAAGTTCCCGATGACCAGTTTTCCGGCGCCGCCGGTGCCACCGGTCCGTCGTCTTCCGGCGACGGAAAAGCTAGTCGAGGCGGCAAGTTGGACCGAGGCTTCGATTGGGAGCTAGTTGGCGATCACAGGGTGGCTCAGCAGGGAAACAATCGGATCGGGAATTTGTACTCTTCGATCGGGTTGCAGAGGCAGTCAAGCGGGAGCAGCTTCGGCGAAAGCTCGCTCTCCGGCGGCGGCGAGTATTACGCACCGATGTTGTCGACGGCGGCCGCTAGCGAGGTTGATACCTTCGGATACCTGCACGACGAGGGATTCAGGGCTAGCGAGGCGAGGAACAAGTTGTCGGAGACTCCGGCGAGGACCGGCGGGTCTTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTCGCTCTGGCGCTGCGGCTCTCGTCGGACGCAACGTGCGCCGATGATCCGAATTTCCTGGATCCGGTTCCGGATGAGTCCGCTCCGAGGCTCTCGTCTTCGCCGGAGGCGGTATCGCATAGATTCTGGGTGAATGGCTGCCTATCATACTCTGACAAAATTCCTGATGGCTTTTACCTGATTCATGGGATGGATTCCTATGTCTGGACAGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCTTCCGTTGATACACTAAAGTCTGTAAATCCCTCCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCAGCTTAAGAGAGCTACAAAACAGAGTTCATGGCATTTCTTGTAGCAGCATAACACCAACGGAGGTTGTAGATCAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCTATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGTAGTCTGTCTGTTGGCCTGTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTACCTTGTCGGATTGCAAGGGGCTGTAAATATTGCAAAAGAGATGATGCTTCATCTTGTCTTGTTCGATTTGGGCTTGACAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGATACTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGACTGTCTGTCTCTTGAGCTTGTCTTTGACAACAGTTCTGCAGACCAGTTTGATGGAAAATCCAATGACAGGAATAGCCATAGGCCAATATCAAATGAAAGCAACAGAAGTTCTCACTTTCCTCCACATCCACAAGCTTGTCATCCAAGCACACATGATCAAGGTTCTGAAATATATATATCATGTAACCCTCCTCAAAACATTATAGACTCGACAACAGTGGGCAAGTATCCACCCCCTTTAAAGCATAAGCGTCCTGTTGGTATACAAACCCCGTTAGCACTAGCAAATGCCAATGATGACGTTATTGAGGGTAGGAGATTTGTTGAAGGAAGTCAACTCATTCCTAGCAAAGCTGCTCAAGAGATAGCCCTTGACATGGAGGATTTGAATATACCATGGAGTGATCTTGTGTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGAACGGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCACGTTGAACGCTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAACGTTTGCGGCATCCGAATATCGTTTTGTTTATGGGGGCAGTCACTGAACCTCCTAACTTATCAATTGTCACTGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGACCTGGTGCCAAAGAGGTGTTGGATGAGAGGCGTAGGCTTGGTATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGAAATCCCCCCATTGTACATCGAGATCTGAAATCTCCAAACCTTCTAGTTGACAAGAAATATACAGTGAAAGCCTGCTCTGATAGCCAGGGCGGTACCTTGCTAGTCCAGGTTTGTGATTTTGGGCTTTCCCGTTTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGAACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCTGATGTTTACAGCTTTGGTGTGATCTTGTGGGAGCTTGCAACGTTACAACAGCCATGGAATAATTTGAATCCAGCACAGGTCGTGGCAGCTGTTGGCTTCAAGGGAAAAAGGCTAGAGATCCCACGTGATGTGAATCCCCACATAGCTGCATTAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTTCCAGTATTATGGATTCTTTGAGGACATTGCTCAAACCCCCTACTCCTCAACCTGGTCGTCCAAACATGCCATTACTCACCTGA 2577 0.4804 MPARRSNYSLLSQVPDDQFSGAAGATGPSSSGDGKASRGGKLDRGFDWELVGDHRVAQQGNNRIGNLYSSIGLQRQSSGSSFGESSLSGGGEYYAPMLSTAAASEVDTFGYLHDEGFRASEARNKLSETPARTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESAPRLSSSPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVNPSIDSSLEVVLVDRRSDPSLRELQNRVHGISCSSITPTEVVDQLSKLVCNRMGGSASVGEDDFVSIWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIARGCKYCKRDDASSCLVRFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRHKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSADQFDGKSNDRNSHRPISNESNRSSHFPPHPQACHPSTHDQGSEIYISCNPPQNIIDSTTVGKYPPPLKHKRPVGIQTPLALANANDDVIEGRRFVEGSQLIPSKAAQEIALDMEDLNIPWSDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHVERFKEFLREVAIMKRLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLGMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKACSDSQGGTLLVQVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWNNLNPAQVVAAVGFKGKRLEIPRDVNPHIAALIEACWANEPWKRPSFSSIMDSLRTLLKPPTPQPGRPNMPLLT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00051 858 MobiDBLite consensus disorder prediction 449 496 - -
Sebi128g00051 858 SUPERFAMILY Protein kinase-like (PK-like) 553 837 IPR011009 -
Sebi128g00051 858 CDD STKc_MAP3K-like 577 838 - -
Sebi128g00051 858 Pfam Ethylene-responsive protein kinase Le-CTR1 188 393 - -
Sebi128g00051 858 MobiDBLite consensus disorder prediction 126 143 - -
Sebi128g00051 858 MobiDBLite consensus disorder prediction 1 41 - -
Sebi128g00051 858 ProSiteProfiles Protein kinase domain profile. 571 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi128g00051 858 MobiDBLite consensus disorder prediction 1 16 - -
Sebi128g00051 858 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Sebi128g00051 858 MobiDBLite consensus disorder prediction 122 143 - -
Sebi128g00051 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Sebi128g00051 858 Gene3D Phosphorylase Kinase; domain 1 564 649 - -
Sebi128g00051 858 Gene3D Transferase(Phosphotransferase) domain 1 650 848 - -
Sebi128g00051 858 Pfam Protein tyrosine and serine/threonine kinase 572 838 IPR001245 GO:0004672|GO:0006468
Sebi128g00051 858 FunFam Serine/threonine-protein kinase CTR1 650 848 - -
Sebi128g00051 858 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 144 841 - -
Sebi128g00051 858 SMART serkin_6 571 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi128g00051 858 FunFam Serine/threonine-protein kinase isoform 1 561 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00051 Sebi-Chr128 875091 884789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00051 1 854 MAP Kinase Kinase Kinase AT5G03730 63.605 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi128g00051 PK_Tyr_Ser-Thr 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00051 K14510 - gmx:100800648 1420.99