Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00036 ATGCTTGCTAGAGGCGTACACAGAGAAGTTCACGCAGCTGAATCGGGGAACCTGAGAGGTAGGGATTGGGAGGAGGTGGCGGCGGTGGGTGAGCGAGCGGTGCGAGAACCATCGAAGAGCGTGGAGCAGTGCAAGAACAAGGTGGATAACCTGAAGAAGCGGTACAAGCTTGAGAGGCACAGGATGAACAATGGCTGCATCTCCACCAGTCACTGGCCTTGGTTCAAGCAGATGGAACACATCGTCGGAAATTCTCTCCCTGCCAAGTTCACACGATGA 279 0.5484 MLARGVHREVHAAESGNLRGRDWEEVAAVGERAVREPSKSVEQCKNKVDNLKKRYKLERHRMNNGCISTSHWPWFKQMEHIVGNSLPAKFTR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00036 92 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 85 IPR044823 -
Sebi128g00036 92 Coils Coil 41 61 - -
Sebi128g00036 92 Pfam Myb/SANT-like DNA-binding domain 13 81 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00036 Sebi-Chr128 542038 542316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00036 16 85 Trihelix Transcription Factor Family AT3G14180 35.616 3.87e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi128g00036 Myb_DNA-bind_4 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00036 - - lja:Lj5g3v0705390.1 142.51