Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00032 ATGGAACACGACTTTGTTGTTGTTATTGTGAGGTCAGACAGTGGAGGTAATGGAAGGAAAACAAAGTTAGTATTGTGTTGTGAAAAGAGTGGGAAGTACATACCATACAAGAGTCAGTTAGTGCAAAATGTTACCGGCTCTAGAAAATGTGGATGTCCTTTTAGACTAAGTGGAAGACCATTGGCTAATGGTGGTGGGTGGAAGCTTAATGCAGTTTGTGGTGTACACAACCATGATGTAGCTGAGAACCTGGAGGGACATCCTTATGTTGGACGTTTAAGTGTCGAGGAGAAGTCATTACTTGAGGACATGACCAAAAACATGATGAAGCCTGGGAGCATCTTACTAACATTGAAGGATCACAATGATCATAATGTTACAACAATCAAACAGTATGTAAACAATACATGGATCATTCCTCATAAAGAAAATTTTGTGGCTGCATGGATTGATAGGGTCATGCACCAAGGGAACACCACCACTAACAGGGTTGAGAGTGTGCATGCAAGGTTGAAAATGCTCTTTCAAGATAGCCGAGGAGACATATGTAATTGTTGGGATGCTATGAACAACTTGATTATTCTTCAACACACTGAAGTAAAGGCATCATTTCAGAGAAGCATAATGAATGTTGAGCACCGATTCAATAACCCGTTGCACGACAAGTTGTTTGGTTTTGTTTCAAAGAATGCAATTGTTCATATTGTTGAAGAGATAAGGCGAGTAGAGTACATTGGTATTGACACTTCAACTTATGGTTGCATATTGAGAAGTACATATGGTCTACCTTGTGCATGTTACATTGCTATATGCAGATTGACACTTCGCCCTGAGTTAGATGAACTTGAACAGAGATTTGATGATCTTGATATGAATGGCAAGGTGGCTTTTAAGTATAAAGCACGTGAACTAGCATTTTCAAACACAACTTCAATGTGTCCACCTCCTGAGAAGGGTTTCTGCCACGAAGGAGACAGAGGAGGAGCAGCAGAGGCAGCAGCCATGGTTCTCAAGACCGAACTTTGCCGTTTCAGTGGGGCGAAAATCTACCCTGGGAAAGGCATCAGATTTATTCGTAGTGATTCTCAGGTCTTCCTGTTTGCCAACTCAAAATGCAAAAGGTATTTCCACAACAGGTTGAAGCCATCAAAGCTCACCTGGACTGCAATGTATAGGAAGCAACACAAGAAGGTTGTTATAGACCTTGATTACTTTTACCTTACATCAAGTTATTGCACATTTGAACAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGCCGAACTACCAAAAGGCCTTACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATTCAGAAAAGAAGAAGTGAGAAGCCAGAGGTTCGAGATGCTGCTAGAGAAGCTGCTCTTCGTGAAATTAAGGAGAGGGTCAAGAAAACAAAGGATGAGAAAAGAGCTAAGAAGGCAGAAACTCAGGCTAAGGTACAAAAATCACAAGGCAAAGGCGGTGTTGGCAAGGTGGCTGCACCCAAAGGTCCTAAGCTTGGCGGTGGAGGCGGGAAGCGCTGA 1554 0.4241 MEHDFVVVIVRSDSGGNGRKTKLVLCCEKSGKYIPYKSQLVQNVTGSRKCGCPFRLSGRPLANGGGWKLNAVCGVHNHDVAENLEGHPYVGRLSVEEKSLLEDMTKNMMKPGSILLTLKDHNDHNVTTIKQYVNNTWIIPHKENFVAAWIDRVMHQGNTTTNRVESVHARLKMLFQDSRGDICNCWDAMNNLIILQHTEVKASFQRSIMNVEHRFNNPLHDKLFGFVSKNAIVHIVEEIRRVEYIGIDTSTYGCILRSTYGLPCACYIAICRLTLRPELDELEQRFDDLDMNGKVAFKYKARELAFSNTTSMCPPPEKGFCHEGDRGGAAEAAAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKVVIDLDYFYLTSSYCTFEQDIAQEAVKKRRRTTKRPYSRSIVGATLEVIQKRRSEKPEVRDAAREAALREIKERVKKTKDEKRAKKAETQAKVQKSQGKGGVGKVAAPKGPKLGGGGGKR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00032 517 SMART 4TRASH 342 380 IPR011017 -
Sebi128g00032 517 Gene3D - 422 490 - -
Sebi128g00032 517 Pfam Ribosomal protein L24e 338 399 IPR000988 -
Sebi128g00032 517 CDD Ribosomal_L24e_L24 337 390 IPR000988 -
Sebi128g00032 517 Gene3D Ribosomal protein L24e 337 398 IPR038630 -
Sebi128g00032 517 Coils Coil 465 489 - -
Sebi128g00032 517 FunFam 60S ribosomal protein L24 337 398 - -
Sebi128g00032 517 MobiDBLite consensus disorder prediction 470 517 - -
Sebi128g00032 517 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 340 392 - -
Sebi128g00032 517 ProSitePatterns Ribosomal protein L24e signature. 344 361 IPR023442 -
Sebi128g00032 517 PANTHER 60S RIBOSOMAL PROTEIN L24 338 494 IPR000988 -
Sebi128g00032 517 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00032 Sebi-Chr128 476368 480683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00032 335 510 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 74.432 3.59e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00032 K02896 - cpap:110822896 242.662