Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00021 ATGGGTTTTACTTTTGAGCAGGACACAATGTTGGTGCCACCATGGCTCAATTCACTGCTTAACACACCCTTTTTCAATGTGTGTCGGATTCATGGAGATGCCGCCAGGAGCGAATGTAACATGTTTTGCTTGGACTGCAATGTTGATGCCTTTTGCTTTTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCTTATCATGATGTGGTGAGAGTGGCAGAAATTCAGAAGGTGTTGGACATTAGTGGAGTTCAGACATATGTGATCAACAGTGCCAGAGTTCTGTTTCTGAATGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTAGACCCATTTCGCTTCTGTTCTTTAGGATGTAAGCTTGTAGGAATAAGGAGAAATGGGGATGCAAGCTTTGTTTTGGATGGTAACAATGAGGCATCTTCAATGGAGGGAATGTCAAGGAGTTCAGTCTCTTCAAGACAGCAAAGAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTATCCAGCCACGCCTCCTACACCTGCTTCAAACGCAAGGAGAAGAAAAGGCATTCCTCACAGGGCTCCTTTTGGCTCCTAA 642 0.4455 MGFTFEQDTMLVPPWLNSLLNTPFFNVCRIHGDAARSECNMFCLDCNVDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIRRNGDASFVLDGNNEASSMEGMSRSSVSSRQQREELREGSQQDMYPATPPTPASNARRRKGIPHRAPFGS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00021 213 SUPERFAMILY B-box zinc-binding domain 25 70 - -
Sebi128g00021 213 Pfam PLATZ transcription factor 69 140 IPR006734 -
Sebi128g00021 213 Gene3D Classic Zinc Finger 26 71 - -
Sebi128g00021 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 211 - -
Sebi128g00021 213 MobiDBLite consensus disorder prediction 157 172 - -
Sebi128g00021 213 MobiDBLite consensus disorder prediction 157 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00021 Sebi-Chr128 271965 273163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sebi128g00021 PLATZ 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00021 - - gmx:100809455 363.999