Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi128g00015 ATGGACTCCTCCACGCGAGAACCTCAAACGGCAACTGCGTTTCATGATTCCGATAATGACAGCTGCAAGCGGAGAGGGGAAGGGAAGGTGGTGAACGGCTACATCGTTTATACTCGACGGAAGAGGAACCTCCATTCCGAGAATGAGAAAGCCAAGAGGCTCAAGACCTGCGACAATGCGGGAGTTAAAGTGGAAAGCCGAGTGTTAGTCGAGGAAGCTGCGGTGCTGAACGACGCCGTTTTCGGGAATTTCAAGCGGCATCGGCGATCGGCGTTGAAGAAGCCGAAGGTTGAGTCAGAAGATGCTGCTGCTGATAAGAGTGACTTGGAATTGAAGATTCCCAACAAGATCATCATGGTCAACAAGAAACCAATGACCGTGAAGGAGCTTTTCGATACTGGTTTGCTCGATGGGATTCCAGTTGTTTACGTGGGTTGCAAGAAGGCTTCAACTTCGGGATTGCGGGGTGTAATTACAGATGGGGGGATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAGAGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAATACATATAAGAGGGCAGCGCAGTATATTTGCTTTGAAAACGGGAAGAGCCTTCTTGAACTATTAGGAGCATGCAGAGCAGCTCCCCTAAGTACTTTGGAGGCGACCATTCAAAATTTTGTTTGTTCGCCACCTGAAGAAAAATATTTTACTTGCAAAAGTTGCAAAGGGTGTTTTCCTTCTTCAACTGTTGAAAGAGTTGGGCTTATATGCCATTCTTGCATGGAAGCAAGGAAATCTGAAGGCAGTTCTATTCATGCAGTTGGCAAAAGAATCAGGTCATCAAAACGGGTTAGCTGCTCAAATTCTACCAGGAGTGCTTCTGTGCCTATTGTTTTCCGAAAGAAAAGTTTGTGCAGCATGGAGAAGAAGCCATCGAAACTGTCAGCAAAATTGAAGACCGCTCCCATTACTTCTAATTCAAAGTGTATATCTCCAAAAAATAAGAGTCAGTGGAGGATCACTAAAAAGCATCAGCGGTTGCATAAATTAATTTTTGAAGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGAAAGAAATTGCTTGAGGGTGTCAAAAGGCGCTCTGGAATTTTTTGTTGGTGCTGCAACACTTTGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGGTGGGCTTCTCGCAGGAAACCTTATGCATACATTTACACGTCGAATGGGGTGTCTCTCCATGAGTTAGCAATATTTCTCTCAAAAGATCGTAAATACACTGCAAAGTATAATGATGATGCATGCGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTATATCAAGTATTCCACGTGCTGGAAGGGTTGAAGGAGTTGATCCCATTGAGCAAATTGCCAAGAGATGCATTCGCATAGTGAAGGACGTTCATGCTGAGATTGGTGGATGTGCTTTATGCAGTGGTTCTGACTTCAGCCAATCAGGATTTGGTCCTCGCACAATAATAATTTGTGATCAGTGTGAAAAGGAATATCATGTCGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGGAGTTGCCGGAAGGGAATTGGTTCTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGAGAAAATCCTGGTTAAGGTGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGAAAGGCTTTTAGAGCCCAATAATGAGATTGATGTAAGATGGAGACTTCTTAATGGTAAAGTTGCTTCTCCTGAAACTAGGCCATTGCTTCTGGAGGCCGTGTCAATGTTTCATGAATGTTTTGATCCTATAGTTGATGCTGCTACTGGACGTGACCTTATTCCCACCATGGTTTATGGAAGGAATTTGCAGAATCAGGATTTTGGAGGAATGTATTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGCCATGCTTCGAATCTTTGGTAGAGATATTGCAGAACTCCCTTTAGTTGCTACAAGAAATAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCATGCATCGAGAGGCTGCTTGCTTTCTTGAATGTGAAGAGCCTTGTACTACCGGCAGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTTAGCAAGATGAAACCTGACCAGCTAGCTGCATTTTTTTATCACAAGACCCACGCCCCCCCAGCTCAAAAAATGACCGAGATTACCCTTGTGCTGCAGCTTACCGAGTATAGAAAGAACTGCAATCAGATGATGGCATTCAAAGGGACAGTTATGCTTCATAAAACGGTGCCTCAATGTCGGGTCATCAATACTCAATCATGA 2421 0.4395 MDSSTREPQTATAFHDSDNDSCKRRGEGKVVNGYIVYTRRKRNLHSENEKAKRLKTCDNAGVKVESRVLVEEAAVLNDAVFGNFKRHRRSALKKPKVESEDAAADKSDLELKIPNKIIMVNKKPMTVKELFDTGLLDGIPVVYVGCKKASTSGLRGVITDGGILCSCCLCNGRRVIPPSQFEIHACNTYKRAAQYICFENGKSLLELLGACRAAPLSTLEATIQNFVCSPPEEKYFTCKSCKGCFPSSTVERVGLICHSCMEARKSEGSSIHAVGKRIRSSKRVSCSNSTRSASVPIVFRKKSLCSMEKKPSKLSAKLKTAPITSNSKCISPKNKSQWRITKKHQRLHKLIFEEDGLPDGAEVAYYARGKKLLEGVKRRSGIFCWCCNTLISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDRKYTAKYNDDACVVCWDGGNLLLCDGCPRAFHKECASISSIPRAGRVEGVDPIEQIAKRCIRIVKDVHAEIGGCALCSGSDFSQSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGNWFCCNDCTRIHSILEKILVKVAERLPESLLDVIKKKQEERLLEPNNEIDVRWRLLNGKVASPETRPLLLEAVSMFHECFDPIVDAATGRDLIPTMVYGRNLQNQDFGGMYCALLMVNSSVVSAAMLRIFGRDIAELPLVATRNKNRGKGYFQTLFSCIERLLAFLNVKSLVLPAAEEAESIWTDKFGFSKMKPDQLAAFFYHKTHAPPAQKMTEITLVLQLTEYRKNCNQMMAFKGTVMLHKTVPQCRVINTQS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi128g00015 806 MobiDBLite consensus disorder prediction 1 26 - -
Sebi128g00015 806 SMART PHD_3 503 560 IPR001965 -
Sebi128g00015 806 SMART PHD_3 441 491 IPR001965 -
Sebi128g00015 806 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 500 562 - -
Sebi128g00015 806 MobiDBLite consensus disorder prediction 1 16 - -
Sebi128g00015 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 427 501 IPR013083 -
Sebi128g00015 806 Pfam Tify domain binding domain 156 208 IPR032308 -
Sebi128g00015 806 Pfam Tify domain binding domain 375 425 IPR032308 -
Sebi128g00015 806 SUPERFAMILY FYVE/PHD zinc finger 494 561 IPR011011 -
Sebi128g00015 806 PANTHER AUTOIMMUNE REGULATOR 60 795 - -
Sebi128g00015 806 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 649 744 IPR016181 -
Sebi128g00015 806 SUPERFAMILY FYVE/PHD zinc finger 429 471 IPR011011 -
Sebi128g00015 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 502 562 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi128g00015 Sebi-Chr128 174663 182634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi128g00015 105 803 PHD Transcription Factor Family AT2G36720 48.501 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi128g00015 - - gmx:100798276 1143.64