Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00070 ATGGGACGATCACCATGCTGTGACAAGGTTGGTTTAAAGAAAGGACCATGGACTCCTGAGGAAGATCAAAAGCTCTTGGCTTATATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTGCCCTCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACCAATTATCTAAGGCCTGATATTAAGAGAGGAAAATTCAGTTTGCAAGAAGAACAAACCATCATTCAGCTCCATGCACTCTTAGGGAACAGGTGGTCTGCAATAGCCACACATTTACCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAACACACATCTTAAGAAAAGGTTAACAAAAATGGGAATTGACCCTGTGACCCACAAGCCTAAGAATGATGCCCTTCTCTCTAGTGATGGCCATTCCAACAAAAGTGCAGCCAACCTTAGCCACATGGCTCAGTGGGAGAGTGCTAGGCTTGAGGCTGAAGCAAGATTGTCTCCTACATCTACACTATCATTCTCAGAGAATAACAATAATGGTAACACCATTCCACCAATTATGACAAGTAGTGGACTTGGGGAAAACACAGTGCATATGATTGAGTTTGTGGGTTCTTCTTCAGAGAGAGGAATTGTGAAAGAAGAAGGTGATCAACAAGAGTGGAAAGGCTATGAAAGCTCAACCCATCTTGCAGAATACAAAGATGGCATGGAAAATTCAATGCCTTTTACGTCTACACTGCATGAGCTGACAATGACCACAATGGAAACCACGTGGGTTTCTGCTACAGAGTCTCTTAGGACCACAACTACTAATAGTGCACATGTCTCTGTTCCTGAGGAAGGGTTCACCAATCTCTTGCTGAATACTAACTCTGATGAGAGGAGTTTGTCACCGGAGGGTGGTGGAGAGTCTAATAATAACTGTGGCAGTGAATTCTATGAAGATAACAAGAACTACTGGAATAGCATTCTTAACTTAGTGAACTCTTCCCCTTCTGATTCACCCATGTTCTGA 1014 0.4329 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSDGHSNKSAANLSHMAQWESARLEAEARLSPTSTLSFSENNNNGNTIPPIMTSSGLGENTVHMIEFVGSSSERGIVKEEGDQQEWKGYESSTHLAEYKDGMENSMPFTSTLHELTMTTMETTWVSATESLRTTTTNSAHVSVPEEGFTNLLLNTNSDERSLSPEGGGESNNNCGSEFYEDNKNYWNSILNLVNSSPSDSPMF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00070 337 CDD SANT 69 112 IPR001005 -
Sebi127g00070 337 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi127g00070 337 CDD SANT 16 61 IPR001005 -
Sebi127g00070 337 SMART sant 13 63 IPR001005 -
Sebi127g00070 337 SMART sant 66 114 IPR001005 -
Sebi127g00070 337 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi127g00070 337 FunFam MYB transcription factor 69 116 - -
Sebi127g00070 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi127g00070 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi127g00070 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Sebi127g00070 337 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi127g00070 337 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sebi127g00070 337 Gene3D - 13 66 - -
Sebi127g00070 337 MobiDBLite consensus disorder prediction 290 310 - -
Sebi127g00070 337 FunFam MYB-related transcription factor 13 66 - -
Sebi127g00070 337 Gene3D - 69 116 - -
Sebi127g00070 337 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00070 Sebi-Chr127 1771689 1773989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00070 1 180 MYB Transcription Factor Family AT3G01140 85.246 1.91e-109 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi127g00070 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00070 K09422 - jre:108980475 469.159