Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00068 ATGGGAACAGTGGAGAATGTATCTAGACCTAGAATGGAAGATCAACAGTTGAAACTGCCACCTGGATTTAGATTTCATCCAACAGATGAAGAGCTCATAAATGATTACCTCGTTAAAAAGGTTATTGACAACTCCTTCTATGCTATAGCAATTGCTGAAGTTGATTTGAACAAGTGTGAGCCATGGGATTTGCCTGGGTTTGCTAATATGGGTGAAACAGAATGGTACTTTTTTAATGTGAGGGATAGAAAATACCCAACTGGTTTAAGGACAAATAGAGCCACTGATGCTGGCTACTGGAAGGCCACAGGCAAAGACAGGGAGATATTCGCGGCAAATGCCTTGATTGGGGTGAAGAAAACACTAGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGGAAAAACCAACTGGATAATGCATGAATATAGATTGGAGGGTAAAAATTCTGAATATAATCTCGCTAGACTTGGAAAGAGAGAATGGGTTATTAGCAGAGTATTTGAAAAGAGTACTTGTGTAAAGAAAATGCATGTTCCAAACTTTGGAAGGTTCGACACCTTTGGAGACGAACTATCACCTCCTTCTCAATTGATTCCATTGACGGATTTTTCTCCGTACAACAACATAACAAGAACAACCGCAGGTGATTTGTCTCAAATGATCAACTTCTCCTATCCAAATCAAATGGAGGATCAGAGAGGACAAGATGACATTGTTGATAGCATGGAAGCTCCTATTTTAGCCTTTCAATCTTCAGGACCCTATGATATTTCCCCTTATGCTAAACCAACCCCTGCATTCTCCAACCATTCCACAATGATTGCACAACAAATTGGCCAACCACAGTATCCTGCTTATTCTCTGCCTCAAGAACAACCCGAGTTAAGGATGCTAGCGGAAAATCCTGGATCGAGTTTACAACACATTCAAAAAATAGATTTTTCTCTCGGAACAGACTTTAATGCTGATATCTCCCCTGTTACAACTAACAATGACATGTTTCAAAGGTGGTTTGGGAATCAAGAACATGCATCAACTTCTACAGGGCCGGTGGACATTGATTACTTGTGGAATTACTAA 1080 0.4009 MGTVENVSRPRMEDQQLKLPPGFRFHPTDEELINDYLVKKVIDNSFYAIAIAEVDLNKCEPWDLPGFANMGETEWYFFNVRDRKYPTGLRTNRATDAGYWKATGKDREIFAANALIGVKKTLVFYKGRAPKGGKTNWIMHEYRLEGKNSEYNLARLGKREWVISRVFEKSTCVKKMHVPNFGRFDTFGDELSPPSQLIPLTDFSPYNNITRTTAGDLSQMINFSYPNQMEDQRGQDDIVDSMEAPILAFQSSGPYDISPYAKPTPAFSNHSTMIAQQIGQPQYPAYSLPQEQPELRMLAENPGSSLQHIQKIDFSLGTDFNADISPVTTNNDMFQRWFGNQEHASTSTGPVDIDYLWNY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00068 359 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Sebi127g00068 359 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Sebi127g00068 359 FunFam NAC domain-containing protein 100-like 28 173 - -
Sebi127g00068 359 Gene3D NAC domain 28 173 IPR036093 GO:0003677|GO:0006355
Sebi127g00068 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 268 - -
Sebi127g00068 359 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00068 Sebi-Chr127 1729699 1730983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00068 17 359 NAC Transcription Factor Family AT5G07680 47.839 4.88e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi127g00068 NAM 6.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00068 - - gmx:100782172 457.988