Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00064 ATGGTCCCAACACTGATCAACTGTGTCAGTCTGTCTGTCAGGAAAATGGCTCTTCTTGGATTTCTTCTTCTGGGATTTTTCTCCTTGGTGTCACATGTAAAAGGGTATGGTGGGGGTTGGATCAATGCTCATGCCACTTTCTATGGTGGAAGTGATGCTTCTGGGACAATGGGTGGGGCTTGTGGGTATGGAAACCTATATAGCCAAGGTTATGGAACTAATACAGCAGCACTGAGCACTGCCCTTTTCAATAATGGCTTAAGCTGTGGTGCATGTTTTGAAATTAAATGTGTGAATGACCCACAATGGTGTCTTCCTGGCTCTATTGTAGTTACTGCCACTAATTTTTGCCCACCTGGTGGTTGGTGTGACCCTCCCAATCACCATTTTGATCTTTCACAACCTATTTTCCAGCACATTGCTCAATATAAGGCTGGGATTGTACCTGTAGCATACAGAAGGGTGAGGTGCAGGAGAAAAGGTGGAATCAGGTTCACCATCAATGGCCATTCTTACTTCAATTTAGTCCTTGTGACTAATGTTGGAGGTGCTGGTGATGTGCATGCTGTGTCCATCAAAGGTTCAAGGACTAGATGGCAAGCAATGTCAAGGAACTGGGGGCAAAATTGGCAGAGCAATTCCTACCTAAATGGACAGAGTCTTTCCTTTGTAGTCACCACCAGTAATGGCCACAGTGTGGTCTCATACAATGCTGCCCCAGCTAGTTGGTCCTTTGGCCAGACATACACTGGGAGGCAGTTCAACTACTAA 771 0.4565 MVPTLINCVSLSVRKMALLGFLLLGFFSLVSHVKGYGGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDPQWCLPGSIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYKAGIVPVAYRRVRCRRKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVSIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNAAPASWSFGQTYTGRQFNY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00064 256 SMART dpbb_1 75 152 IPR007112 -
Sebi127g00064 256 Gene3D - 28 158 IPR036908 -
Sebi127g00064 256 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 251 IPR007117 -
Sebi127g00064 256 SUPERFAMILY PHL pollen allergen 159 251 IPR036749 -
Sebi127g00064 256 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 162 IPR007112 -
Sebi127g00064 256 PANTHER EXPANSIN-A15 22 254 IPR002963 GO:0009664
Sebi127g00064 256 FunFam Expansin 30 158 - -
Sebi127g00064 256 Pfam Lytic transglycolase 75 152 IPR009009 -
Sebi127g00064 256 SUPERFAMILY Barwin-like endoglucanases 24 180 IPR036908 -
Sebi127g00064 256 FunFam Expansin 162 254 - -
Sebi127g00064 256 Gene3D - 162 254 IPR036749 -
Sebi127g00064 256 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 97 108 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 109 119 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Sebi127g00064 256 PRINTS Expansin signature 70 84 IPR002963 GO:0009664
Sebi127g00064 256 CDD DPBB_EXPA_N 39 157 - -
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 39 54 IPR007118 GO:0005576
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 79 97 IPR007118 GO:0005576
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 57 75 IPR007118 GO:0005576
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Sebi127g00064 256 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Sebi127g00064 256 Pfam Expansin C-terminal domain 163 240 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00064 Sebi-Chr127 1666207 1667445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00064 15 254 Expansin Gene Family AT2G03090 79.032 2.43e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00064 K20628 - gmx:100791784 474.937