Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00051 ATGGGGAGTAGTCAATCTGCACCATCACAGCTTCAATTGGATTTGGAAGCTAAAGCCATACTCAACAGTCGATGGTGGAACACGTCTCTTCCATACTACAATGTCTGCCGTCGCTGTCAGTGGTACGGTATAGCTTGCAACAAGGCAGGAAGCATAACAGAAATCAACTACTATTCTGAAGCAGCGCTAAGATATTTGCCAAACACAACCTATTTGGATCTTAGCTACAATAAACTCACTCGACCGGTTCCCCAATATATCCATGCCTATTATGTGGTGTTTTCCTACAATAATTTGAAAGGTCCCATTCCAAATGGTTTCAATCCTTATGCCCTAATAGGCAACAAGGATGTTTGTAGCAACATTCCATATCCGCAACTCTATTTCCAATTCAAACCTTGTCCAGCAAGCAGCAAGACAACCATCAAAGTAATACTTGCCACAGTTCTTTCTGTCCTTATTTTTCGAATCCTAGCTTTCTCACTATGCATGTGTTTGAAGCTTCATTTCAAAGGAATTAAGAACAAACATGCAGAATCAACAACTAGGAATGGGGATATATTCTCTATATGGAACTATGATGGAAACATAGCATATGAAGACATCATCAGAGTGACACAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGGAGTGTTTACAAGGCACAATTACCTAGTGGCAAGGTTGTTGCCTTAAAGAAACTACATGGTTTTGAAGCAGAGGTGCCAGCTTTGGATGAGAGTTTTAGAAATGAAGTGAGGGTATTATCAGAAATAAAGCATCGACATATTGTGAAGCTTTATGGATTCTGCTTGCACAATAGAATCATGTTTTTGATCTATCAATACATGGAGAAAGGTAGCTTGTTCTCTGTCTTGTATGATGATGCAGAAGCAATGGAATTGGATTGGAGAAAGAGGGTTGACATTGTCAAAGGCATTGCACATGCTTTGTCATATCTTCATCATGATTGCAACCCTCCAATAGTGCATAGAGACATAGCTACCACAAATATCTTACTTAACTCAGAGTGGCAGCCTAGTGTTGCGGACTTTGGCACAGCCAGACTCCTCCAACATGATTCATCAAATCAAACTATAGTTGCTGGAACCATTGGATATATAGCTCCGGAGCTTGCTTACACAATGGTTGTGAGTGAAAAGGGTGATGTTTATAGCTTTGGAGTAGTGGCACTTGAAACTTTAGTGGGAAAGCATCCTAAGGAAATATTGTCGTCACTTCAATCAACATCAACTCATGACATAGCACTATGTGAAGTACTGGACCAGCGCCTCCCACTACCAAATATGTCTGTTTTAACTGGCATAGTTCATGTTGCCATGATAGCATTTGCATGCTTAAATCCCAATCCTAGCTCTCGCCCAACAATGAAACATGTGTCACAATGTTTTCTTAGTCGATTAACTGTACTAAGCATTCCTTTACATGAAATTTCTATGCGGCAACTCATGAGTCAAGAACTCAAGCACTATTTAGAATTTTGA 1518 0.3999 MGSSQSAPSQLQLDLEAKAILNSRWWNTSLPYYNVCRRCQWYGIACNKAGSITEINYYSEAALRYLPNTTYLDLSYNKLTRPVPQYIHAYYVVFSYNNLKGPIPNGFNPYALIGNKDVCSNIPYPQLYFQFKPCPASSKTTIKVILATVLSVLIFRILAFSLCMCLKLHFKGIKNKHAESTTRNGDIFSIWNYDGNIAYEDIIRVTQDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGFEAEVPALDESFRNEVRVLSEIKHRHIVKLYGFCLHNRIMFLIYQYMEKGSLFSVLYDDAEAMELDWRKRVDIVKGIAHALSYLHHDCNPPIVHRDIATTNILLNSEWQPSVADFGTARLLQHDSSNQTIVAGTIGYIAPELAYTMVVSEKGDVYSFGVVALETLVGKHPKEILSSLQSTSTHDIALCEVLDQRLPLPNMSVLTGIVHVAMIAFACLNPNPSSRPTMKHVSQCFLSRLTVLSIPLHEISMRQLMSQELKHYLEF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00051 505 Gene3D Ribonuclease Inhibitor 10 116 IPR032675 -
Sebi127g00051 505 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 172 287 - -
Sebi127g00051 505 ProSiteProfiles Protein kinase domain profile. 209 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi127g00051 505 PANTHER LEUCINE RICH REPEAT KINASE 2 63 477 - -
Sebi127g00051 505 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Sebi127g00051 505 SUPERFAMILY L domain-like 9 107 - -
Sebi127g00051 505 Gene3D Phosphorylase Kinase; domain 1 171 287 - -
Sebi127g00051 505 SMART tyrkin_6 209 475 IPR020635 GO:0004713|GO:0006468
Sebi127g00051 505 FunFam MDIS1-interacting receptor like kinase 2 288 481 - -
Sebi127g00051 505 Gene3D Transferase(Phosphotransferase) domain 1 288 481 - -
Sebi127g00051 505 SUPERFAMILY Protein kinase-like (PK-like) 188 473 IPR011009 -
Sebi127g00051 505 Pfam Protein kinase domain 215 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi127g00051 505 ProSitePatterns Tyrosine protein kinases specific active-site signature. 333 345 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00051 Sebi-Chr127 1469324 1471453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00051 61 381 Receptor kinase-like Gene Family AT4G08850 42.941 1.48e-84 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi127g00051 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00051 - - gmx:102661105 632.098