Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00040 ATGTCAGAAAAACTTTTCAACAATTCATCCTTGGGTGTACCTTTACTACCCGAGTGTAAGCACCCTTTGCTAGGACATTCCATAGATGAGGAAAAAGTTGTAGCTTCTCATCCTCACACCAAGAATACCGTATCTTTCTCTCGCACATGTTTCAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGATGGTTAAGCTTAGTTCTTCTATTTGCTATTGCTGTTGTAGCCTTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTTAGACATTAGAACCTACCCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGGTTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGCAACTTATTCCCCATTGAGGAGCTTCAAGTGGTTGGTGGTTTTGCAATTAGTGGAAAGCAATTCTTTGTGATATTAGTTGCTCTTATAATTTTGCCTACAGTTTGGTTGGACAACTTGAGTATACTTTCTTATGTATCTGCAAGTGGTGTGCTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGCATCAATTGATGAAGTTGATTTTCACCAAAAGGGAACTCTTGTTAATTGGAATGGGATCCCCACATCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCAACTCTGTACAATTCTATGAGAAACAAACATCAATTCTCTAATGTCTTACTTGTGTGCTTTATATTAGCTACCATTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTCCAGATGTTGAATCACAGGTAACATTAAACCTGCCACTAAACAAAATAAGCTCAAGAATAGCAATATATACTACCTTGGTTAATCCCATAACCAAGTATGCTTTGATGACAACACCTATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTCACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGTATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACAGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGGAATGGGAATATCTGGGACATACACCTCTGTCACTGACATAGTCCACAATTTGTAA 1302 0.384 MSEKLFNNSSLGVPLLPECKHPLLGHSIDEEKVVASHPHTKNTVSFSRTCFNGLNAISGVGILSVPYALASGGWLSLVLLFAIAVVAFYSGLLMKRCMDKNLDIRTYPDIGELAFGKIGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELQVVGGFAISGKQFFVILVALIILPTVWLDNLSILSYVSASGVLASAIIILSISWTASIDEVDFHQKGTLVNWNGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFILATIGYASMAIIGYLMFGPDVESQVTLNLPLNKISSRIAIYTTLVNPITKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIGMGISGTYTSVTDIVHNL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00040 433 PANTHER OS05G0424000 PROTEIN-RELATED 52 416 - -
Sebi127g00040 433 Pfam Transmembrane amino acid transporter protein 43 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00040 Sebi-Chr127 1207701 1209494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00040 30 430 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.955 1.26e-171 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00040 K15015 - gmx:100794374 660.603