Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00039 ATGGAAGGTGAGCTGCACTGTGATGATGCTTCTTCTCTCAACTTTCCCCTAATCGTAGACCAAAACCAACACTTCCTTGAAAGGAGCCAACTTTCTGGTAACGGACCCTGCAATGGCACCGCATCTTTCCTCAACACCTGTTTCAATGGACTCAATGCTTTGTCAGGTGTTGGGATTCTTTCTGTTCCATATGCTCTAGCCTCTGGAGGGTGGTTAAGTTTAGTTCTTCTCTTTTCTATTGCTGCTATAGCATTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTCAAACATTAGAACCTATCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGGAGACTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCCTGATTCTAGAAGGGGACAACTTGAGTAACTTATTCCCCATTGAGGAGCTTCATGTGGCTGGTTTAGCAATTGGTGGAAAGCAATTATTTGTGATATTGGTTGCTCTTATTATCTTGCCTACTGTTTGGTTGGATAACTTGAGTCTACTTTCTTATATATCTGCAAGTGGTGTGTTTGCTTCAGCTATCATCATCTTGTCAATATCATGGACTGGATCAGTTGATGGAGTTGGTTTTCACCAAAAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACAGCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCCACCCTATACAATTCCATGAGAAACAAACACCAGTTCTCTAATGTACTATTTGTATGCTTTGTGATAACCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTCCAGAAGTTGAGTCACAGGTACCTTTAAACCTTCCACTAAACAAAATAAGCTCAAAAATAGCAATATATACTACCTTGGTCAACCCCATATCCAAGTATGCTCTGATGACAACTCCAATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTCACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGTATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACTGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGCGATGGGAATATCTGGGACATACATATCCGTCAGTGAAATAGTCCAACATTGGTAG 1290 0.4016 MEGELHCDDASSLNFPLIVDQNQHFLERSQLSGNGPCNGTASFLNTCFNGLNALSGVGILSVPYALASGGWLSLVLLFSIAAIAFYSGLLMKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELHVAGLAIGGKQLFVILVALIILPTVWLDNLSLLSYISASGVFASAIIILSISWTGSVDGVGFHQKGTLVNWSGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLFVCFVITTVGYASMAIIGYLMFGPEVESQVPLNLPLNKISSKIAIYTTLVNPISKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIAMGISGTYISVSEIVQHW 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00039 429 PANTHER OS05G0424000 PROTEIN-RELATED 50 411 - -
Sebi127g00039 429 Pfam Transmembrane amino acid transporter protein 40 419 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00039 Sebi-Chr127 1190026 1197135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00039 19 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.191 3.18e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00039 K15015 - gmx:100794374 657.521