Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00035 ATGGAAGGGACAGGTCCAAAAACATTCAGCTTCGACACTGAGCCGCAAAATCCCAGATCAACCATAAAGCAACTTTCTTTTGCAAATCTTGCTGAGAATTACCCACCTGGCTTTCCCAAAAAGGTATTTGCAGAGATCATAGGCACCTTCCTATTGGTTTTTGTGGGAAGTGGTTCTGCTGGCCTTAGTGCTATTGATGAAAACAAAGTCTCAAAATTGGCAGCTTCACTTGCAGGGGGATTCATAGTGACAGTGATGATTTATGCAATTGGACACATCTCTGGGGCACACATGAATCCAGCAGTCTCCTTAGCTTTTGCCACCGTCAGCCATTTTCCTTGGAAACAGGTTCCATTTTATATTGCAGCTCAACTAACAGGAGCAATTTCTGCTTCATATACGCTACGACTGCTATTAGAGCCATCAAAGCAGATTGGGGCAACATCACCTTCTGGATCAAACATTCAAGCACTAATTATGGAAATTGTGTCAACATTCACTATGGTTTTCATTGCCACCGCCGTTTCCACCGACACAAAAGCTATAGGAGAGCTAGGAGGAGTAGCAGTAGGTTCCTCTGTTAGCATAGCAAGCATTGTCGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCTAGTGCATCTTACAAGGGAATTTGGGTCTATTTGGTTGGACCAGTTACTGGGGCACTTTTAGGGGCATGGTCTTATGTTGTTATTCAGGACACAGATAAGCCAGCTCTTGCAATTTCACAATTTTCTACCCTTTCATTCAAGCTACGCCAGAAGATTAAAGGAACTGAGCACGATGGTAACAATGACCATGACCACCACCATCAATACCCGGTGTGA 876 0.4441 MEGTGPKTFSFDTEPQNPRSTIKQLSFANLAENYPPGFPKKVFAEIIGTFLLVFVGSGSAGLSAIDENKVSKLAASLAGGFIVTVMIYAIGHISGAHMNPAVSLAFATVSHFPWKQVPFYIAAQLTGAISASYTLRLLLEPSKQIGATSPSGSNIQALIMEIVSTFTMVFIATAVSTDTKAIGELGGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIASASYKGIWVYLVGPVTGALLGAWSYVVIQDTDKPALAISQFSTLSFKLRQKIKGTEHDGNNDHDHHHQYPV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00035 291 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 PANTHER AQUAPORIN NIP2-1 24 259 IPR034294 -
Sebi127g00035 291 CDD MIP 40 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 Gene3D Glycerol uptake facilitator protein. 10 256 IPR023271 -
Sebi127g00035 291 Pfam Major intrinsic protein 38 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi127g00035 291 SUPERFAMILY Aquaporin-like 34 255 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00035 Sebi-Chr127 1030514 1089852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00035 40 279 Major Intrinsic Protein MIP AT5G37820 45.228 1.39e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00035 K09874 - gmx:100788071 356.295