Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00022 ATGGGAAGACCACCTTGTTGTGACAAAGAAGGTGTCAAGAAAGGACCTTGGACTCCTGAAGAAGATATCATTCTGGTCACTTATGTACAGGAACATGGTCCTGGCAATTGGAGGGCTGTTCCCACCAAGACAGGGTTGTCAAGATGCAGTAAGAGTTGCAGACTTAGATGGACAAATTACCTAAGGCCAGGAATCAAAAGAGGCAACTTTACAGAACAAGAGGAGAAGATGATAATCCATCTTCAAGATCTTTTAGGAAACAGATGGGCTGCTATAGCTTCATACCTTCCACAGAGAACAGATAATGACATAAAAAATTATTGGAACACCCATTTGAAAAAGAAGCTCAAGAAATTGCAAACAGGTTCTGAAGGGAGTTTGGGAGATGGGTTTTCAGCATCACAGAGGATTCCTAGAGGTCAATGGGAAAGAAGGCTCCAAACAGATATCCAAATGGCTAAAAAAGCTCTTAGTGAAGCCCTTTCACCAGAGAAACAATCTTCTTTATCTGCATCAAACCCTTCCAACAGTACTACCTCCTCTTCCACTAAACCAACACAATCTTTGTGCTATGCTTCAAGTGCTGATAACATAGCTCGTTTGCTGAAAGGTTGGATGAAAAATCCACCAAAGTCCTCTCGGACTAACTCAGCTATGACCCAAAATTCCTTCAACAATTTGGCTGCTGCAGGGACTGACACTGCTTCTAGTGAAGTAAGCCTAAATGGAGCAAAAGGAAACAGTGCTGAATTGTCTGAGACATTTGTATCCTTGTTTGGTTTTGAGTCTTTGGAGTCTTCAAATTCTGAGTTTTCTCAGTCTTTGTCCCCTGAGGCTACTGTTTTACAAGATGAAAGCAAGCCTGATATTGGTGCAGAAATAATGCCCTTTTCTTTGCTTGAAAAATGGCTTCTTGATGAGGCTGGTTGTCCAGAGAAAGTAGGCATAAGTGATGCTCAGATTTTTTAG 969 0.4159 MGRPPCCDKEGVKKGPWTPEEDIILVTYVQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQTGSEGSLGDGFSASQRIPRGQWERRLQTDIQMAKKALSEALSPEKQSSLSASNPSNSTTSSSTKPTQSLCYASSADNIARLLKGWMKNPPKSSRTNSAMTQNSFNNLAAAGTDTASSEVSLNGAKGNSAELSETFVSLFGFESLESSNSEFSQSLSPEATVLQDESKPDIGAEIMPFSLLEKWLLDEAGCPEKVGISDAQIF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00022 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi127g00022 322 FunFam Transcription factor MYB30 68 126 - -
Sebi127g00022 322 CDD SANT 16 61 IPR001005 -
Sebi127g00022 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 232 - -
Sebi127g00022 322 FunFam MYB-related transcription factor 13 66 - -
Sebi127g00022 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Sebi127g00022 322 MobiDBLite consensus disorder prediction 157 188 - -
Sebi127g00022 322 Gene3D - 13 66 - -
Sebi127g00022 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi127g00022 322 MobiDBLite consensus disorder prediction 161 188 - -
Sebi127g00022 322 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi127g00022 322 SMART sant 66 114 IPR001005 -
Sebi127g00022 322 SMART sant 13 63 IPR001005 -
Sebi127g00022 322 CDD SANT 69 111 IPR001005 -
Sebi127g00022 322 Gene3D - 68 128 - -
Sebi127g00022 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Sebi127g00022 322 MobiDBLite consensus disorder prediction 119 140 - -
Sebi127g00022 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi127g00022 322 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00022 Sebi-Chr127 421990 423366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00022 1 319 MYB Transcription Factor Family AT5G62470 51.781 7.76e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi127g00022 Myb_DNA-binding 3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00022 K09422 - gmx:778080 472.626