Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi127g00010 ATGATTCAATCTGCGTCTGCTGCACCATCGCAGCTTCAATTGGAAGCTAATGCTATACTCAACAGTCGATGGTGGGATTCTGACTTCAATATCTCAGATCGCTGTCTGTGGGGTGGTATAGCTTGCAACGACGCAGGAAGCATAACAGAAATCCACTATGGGAAATATTATAATCATTATAAAGAAGGGTTTCAATTTGCAAGACTCAACCTCTCTGCTTTCCACAACTTAGAAAAGCTTGTTGTCATTGGAACAGGACAAGGAGGGACCATCCCACCAGAAATAGGTACTCTCACCAAACTCACTTATCTTGATCTTTGCTACAATTCTTTTGAAGGTGAGATACCTCCTTCAATGGGAAATCTTAGCCTATTACAGAGCCTATACTTGTCTCATAACAGAATCAATGGGACATTGCCTATTTCACTAACGAGTCTCACCAGATTAAAAATGCTTGACATTTCCAACAATCTTCTACTTGGTCCCCTCCCTGATTTAGTTCAGCTAACCAACTTGCAAGTGTTGCGGCTAAATAACAACTCCATCAATGGGACCTTGCCCTTTTCACTTTCACATCTCACACAATTGGTAGAACTTGACATTTCAAAAAATCTGCTGGTTGGTTCCCTCCCTTATATGGATCAATTAATCCACTTGCAAGAGTTGCGGCTAAGTGAAAACACCATCGGTGGGAACATATTAATACCCTCGTCAATTAAAAGCCTTATCAATATCAACCTCAGTTTCAACGTTTTCACCGGTGAAATACCACAACTACTTTATCTCCCAATGTTAAACAATTTGGATCTAAGCTACAATAATCTTTCTGGAACGATTCCACAATATCTCCTGCACATCAAATATGTGAACATTTCTTACAATTATCTGAAAGGTCCCATCCCAAATGGTATCAATCCTTATGCTCTAATAGGCAACAAGGAAGTATGCAGCAACATTTCGTATCTCCAATTCCAACCTTGTTCATCTCACAGCAAGAAAAGTAACAAAGTAGTGAACAAGCTAGTCATACTTCTTCCTATCCTCATTTTTCTAGTCTTGACCTTCGCACTACTTTTGTGTCTAAAGCTTCGTCTTGTTGCAACCAAGAAAAAACATCAAAACACAGTGACAACTAAGAATGGGGATTTGTTCTGCATATGGAACTATGATGGAAATATTGCATATGAAGACATCATTAGAGCAACTGAGGACTTTGACATGAAATACTGCATTGGAACAGGAGCATATGGGAGTGTTTACAAGGCACAATTACCTGGTGGTAAGGTTGTTGCCTTGAAGAAACTCCACAGATATGAAGCAGGGGTGGCGACTTTTGATAAGAGTTTTAGAAATGAAGTGAGGGTATTATCAAAAATAAAGCATCGACACATTGTGAAGCTTTATGGATTCTGCTTGCATAAACGAATCATGTTTTTGATCTATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGCAGAAGCAATGGAATTGGATTGGAAAAAGAGGGTTGACATTGTCAAAGGCATTGCACATGCTCTGTCATATCTTCATAATGATTGCAACCCTCCAATAGTGCATAGAGACATAGCTACCACCAATATCTTACTTAACTCTGAGTGTGAGCCAAGTGTTGCAGACTTTGGCACAGCCAGACTCCTCCAACATGATTCATCCAATCAAACTATAGCCGCTGGAACCATTGGATATATAGCTCCAGAGCTTGCCTATACTATGGTTGTAAGTGAAAAGTGTGATGTTTATAGCTTTGGAGTAGTGGCACTTGAAACTTTAGTGGGAAGGCATCCAAAGGAAATATTGTCATCTCTTCAATCAACATCTGCTAATGGCATCACATTATGTGAAATACTGGACAAACGACTCCCACTACCTAATAGGACTATTCTACTAGACATAGTTCATGTTGCCATAGTAGCATTTGCCTGCTTAAATCATAATCCTTGCTCCCGACCAACAATGGAATGTGTTTCTCACTGTTTTCTTACTCACCCAACACCATTGAGCATTCCTTTACAGGAAATTTCATTGCTACAGCTCATGAGTCAAGAACTCAAACATTATGTAAAACTGTAA 2106 0.3946 MIQSASAAPSQLQLEANAILNSRWWDSDFNISDRCLWGGIACNDAGSITEIHYGKYYNHYKEGFQFARLNLSAFHNLEKLVVIGTGQGGTIPPEIGTLTKLTYLDLCYNSFEGEIPPSMGNLSLLQSLYLSHNRINGTLPISLTSLTRLKMLDISNNLLLGPLPDLVQLTNLQVLRLNNNSINGTLPFSLSHLTQLVELDISKNLLVGSLPYMDQLIHLQELRLSENTIGGNILIPSSIKSLININLSFNVFTGEIPQLLYLPMLNNLDLSYNNLSGTIPQYLLHIKYVNISYNYLKGPIPNGINPYALIGNKEVCSNISYLQFQPCSSHSKKSNKVVNKLVILLPILIFLVLTFALLLCLKLRLVATKKKHQNTVTTKNGDLFCIWNYDGNIAYEDIIRATEDFDMKYCIGTGAYGSVYKAQLPGGKVVALKKLHRYEAGVATFDKSFRNEVRVLSKIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDDAEAMELDWKKRVDIVKGIAHALSYLHNDCNPPIVHRDIATTNILLNSECEPSVADFGTARLLQHDSSNQTIAAGTIGYIAPELAYTMVVSEKCDVYSFGVVALETLVGRHPKEILSSLQSTSANGITLCEILDKRLPLPNRTILLDIVHVAIVAFACLNHNPCSRPTMECVSHCFLTHPTPLSIPLQEISLLQLMSQELKHYVKL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi127g00010 701 Gene3D Ribonuclease Inhibitor 167 213 IPR032675 -
Sebi127g00010 701 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Sebi127g00010 701 SUPERFAMILY Protein kinase-like (PK-like) 391 669 IPR011009 -
Sebi127g00010 701 ProSiteProfiles Protein kinase domain profile. 405 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi127g00010 701 ProSitePatterns Tyrosine protein kinases specific active-site signature. 529 541 IPR008266 GO:0004672|GO:0006468
Sebi127g00010 701 PANTHER LEUCINE RICH REPEAT KINASE 2 62 165 - -
Sebi127g00010 701 SUPERFAMILY L domain-like 22 304 - -
Sebi127g00010 701 FunFam MDIS1-interacting receptor like kinase 2 484 677 - -
Sebi127g00010 701 Pfam Protein kinase domain 410 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi127g00010 701 Gene3D Transferase(Phosphotransferase) domain 1 484 675 - -
Sebi127g00010 701 Gene3D Ribonuclease Inhibitor 10 166 IPR032675 -
Sebi127g00010 701 Gene3D Ribonuclease Inhibitor 214 324 IPR032675 -
Sebi127g00010 701 FunFam Leucine-rich repeat receptor protein kinase MSP1 367 483 - -
Sebi127g00010 701 FunFam Nuclear pore complex protein NUP107 9 165 - -
Sebi127g00010 701 ProSitePatterns Protein kinases ATP-binding region signature. 411 433 IPR017441 GO:0005524
Sebi127g00010 701 SMART tyrkin_6 405 671 IPR020635 GO:0004713|GO:0006468
Sebi127g00010 701 Gene3D Phosphorylase Kinase; domain 1 365 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi127g00010 Sebi-Chr127 97778 133263 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi127g00010 84 577 Receptor kinase-like Gene Family AT4G08850 40.232 2.29e-112 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi127g00010 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi127g00010 - - aprc:113862530 812.757