Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi126g00071 ATGCCTCTTTCTCGTAAACCGTTTTCTCCTTCCTCTCCTTCGCCGTCGAATGGAACCAACCAAAACGACGGCGTTGCCAAAACCGGCAATTCTGTTCCGGCGCGGCGACTCACCAGACAGAGAAAGCTCCGGCACCTCAGTGACCAAGACATTGGCTCGTTGTATTCCACTGATTCGTCACCATCGTCTTCTTCTCCTTCGTTTCAAGGTTCACCTGAGCCATCTCTCAAGTCTCGCTCACTCGGCTGTTCCGACCACCGCTCCTCCTCTGCCTCGCCGCAACCGCTGCCGCTTCCCGAGTCGCCGTTGACCCGACGACCCGGGTCAACCCGCCCCGATCTCTTTGCACACCGGAGCTTTCCTCTTCCGAGGAAGACAGAAGATCATGATGGAATGGTAAATACAAAACCTTCACACAATTTGGGAAAATCCTCTTTAGATTCTAATCTTGCAAATTCTAAATATAATCTGAGAGTGCATATTCCAGCTGCAAGGTTCTTGACAGTTGTTAATGTAGGCAATAGTTCATATAAAGACCCTAGAATTGTCTCTCATGATAATGATGACTCTGAAAGTATTCCCAACTTGAGCTTGGGTGTTGCTGCCAAGAGTGCCCCAACAAGTGCAGTCACCACTCCTGTTACTAGTCCACGTAGATCAAGCAATGTGGATTTCCTTGATCCTACTGCCAATTTTCCTTTAGAAGTTAATGACAATGTGAAAATGTTACCAGCTAAAACTTTTCATAGTCCAGACCATTCTCCTCCTCATTGCCCACTGATCCTTGCTCGTTTCATTAATCCAAAAACTCAAGAGGGATCTCAGCACCCTAAATTTTTGTCCAGTATGTGGCCTGAAAATAACCATGTTGATGCACATCCATTACCCCTTCCTCTTAGAGCTTCACCACCAGCACAATTACCTATGCTGCATCAACCAAGTACCATGCCTCATGCAATGGAAAATCTTCCTTCAGTGAAAGGTCGATGGCAGAAAGGAAAACTTATTGGACGTGGTACCTTTGGGAGTGTTTTTCATGCAACCAACCTTGAGACTGGAGCCTCATGTGCAATGAAGGAGGTGGATCTAATTCCAGATGATCCTACATCTGTTGAGTGCATGAAGCAACTAGAGCAGGAAATCAGAATTCTCCGTCAACTACGCCATCCCAATATTGTGCAGTACTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAGTATGTCCATCCTGGATCAATTAACAAATTTATTCATGAACATTGTGAAGCTATGACAGAATCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCTGGATTGGCTTACTTACACAGTACCAAAACTATCCACAGAGATATCAAAGGCGCAAACTTGCTGGTCAATGAATCAGGCATTGTCAAGCTTGCTGATTTTGGGATGGCAAAAATTTTGACAGGGAATTCATATGAACTTTCTTTGAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCATGAAAGCCACCACAAAAAACGAATCCAATCCTGACCTTGTCATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACAGGCAAACCTCCTTGGGGTGAATTTGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAACAGTCCCCGCCTATACCGGAAACTTTATCTTCAGTGGGAAAGGATTTCCTCCAGCAATGTTTTCAAAGGGACCCTGCAGATCGACCATCTGCAGAGATGCTTCTTAAACATGCCTTCGTGCAGAATTTGCATGATCAAGATCTTCTAGTTCATCCTCCTATTGGAGACCCAGGATCAAGAGATAATTCTCCTAGTCCCAGTGACACTACCAAAAATAGACGTCACTCAATGCCATCCTCCATGAGTGCACGGACTTTTAACAAAATTCAGAAACTAACCAGTGACACTTCCCAACAAAATACTACTGAGGAATCTAATCACATCATACCTTATCGTCACTCTCAAGTTCCAGAAGTTAACATTCTTCAGTCTTCCTTCAAACCCGATACCCTCAATTACATGTCTGTTGCAAACAACAGCAACATACCACTCACTGTCATGAGAATGATCACGCACCTTTGA 2115 0.4454 MPLSRKPFSPSSPSPSNGTNQNDGVAKTGNSVPARRLTRQRKLRHLSDQDIGSLYSTDSSPSSSSPSFQGSPEPSLKSRSLGCSDHRSSSASPQPLPLPESPLTRRPGSTRPDLFAHRSFPLPRKTEDHDGMVNTKPSHNLGKSSLDSNLANSKYNLRVHIPAARFLTVVNVGNSSYKDPRIVSHDNDDSESIPNLSLGVAAKSAPTSAVTTPVTSPRRSSNVDFLDPTANFPLEVNDNVKMLPAKTFHSPDHSPPHCPLILARFINPKTQEGSQHPKFLSSMWPENNHVDAHPLPLPLRASPPAQLPMLHQPSTMPHAMENLPSVKGRWQKGKLIGRGTFGSVFHATNLETGASCAMKEVDLIPDDPTSVECMKQLEQEIRILRQLRHPNIVQYYGSEIVGNHLYIYMEYVHPGSINKFIHEHCEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLADFGMAKILTGNSYELSLKGSPYWMAPEVMKATTKNESNPDLVMAIDIWSLGCTIIEMLTGKPPWGEFEGPSAMFKVLQQSPPIPETLSSVGKDFLQQCFQRDPADRPSAEMLLKHAFVQNLHDQDLLVHPPIGDPGSRDNSPSPSDTTKNRRHSMPSSMSARTFNKIQKLTSDTSQQNTTEESNHIIPYRHSQVPEVNILQSSFKPDTLNYMSVANNSNIPLTVMRMITHL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi126g00071 704 MobiDBLite consensus disorder prediction 1 133 - -
Sebi126g00071 704 FunFam Mitogen-activated protein kinase kinase kinase 5 327 627 - -
Sebi126g00071 704 ProSiteProfiles Protein kinase domain profile. 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi126g00071 704 SMART serkin_6 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi126g00071 704 Pfam Protein kinase domain 331 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi126g00071 704 MobiDBLite consensus disorder prediction 599 637 - -
Sebi126g00071 704 Gene3D Transferase(Phosphotransferase) domain 1 327 625 - -
Sebi126g00071 704 MobiDBLite consensus disorder prediction 50 94 - -
Sebi126g00071 704 MobiDBLite consensus disorder prediction 611 637 - -
Sebi126g00071 704 SUPERFAMILY Protein kinase-like (PK-like) 328 670 IPR011009 -
Sebi126g00071 704 MobiDBLite consensus disorder prediction 10 28 - -
Sebi126g00071 704 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 601 - -
Sebi126g00071 704 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Sebi126g00071 704 MobiDBLite consensus disorder prediction 118 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi126g00071 Sebi-Chr126 1745439 1750909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi126g00071 6 593 MAP Kinase Kinase Kinase AT5G66850 43.780 3.88e-150 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi126g00071 Pkinase 1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi126g00071 - - gmx:100819530 883.248