Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi126g00055 ATGATTCCACTTTGGTTTGTGATTCCTACTCGACTCCCAGTTCGAGATTTGCCATTCATTTATGTGATTCCTAAATCGTTCCGACTTGGAATCTTCCCTGTTCATTTAGTTCGCGCTTCCATTGTTCATGCCTCTGGATTGGCCCAAGATGATGAAGACAACAATTGGTGCTACAAATTAAGGAACTGGCATATCTGCATGAAGGCTGTTGCAAAAGATCCATCTGGCAAATACAAGGTATTCTATTTCAACTTGATTGTTGGTTCATCTACTTCTTCTTCTTCCTTGCCCTTCTATGCAAATGGGGCATCAGATCCAATAGGTGATTTCCAGCTTCAAGACCAGCTTTCTTTCTTGAATGATGATTCTCCTACACTTGGCCATAACAAGAACCTTGATTTGTTTTACCCTCCTCCTCACTCTGACTTGTCTTCAAGTCTCACTGCTACTGCTGACCCATCTCTCTTTCCTTCCTTTGGTTGGGGAGGGTCTCTTCACAGGAGAAGTTGCTCTGTCAATGATGCTTGTTTGGGTTCTGAGGACCCAAATTCTGGGTTGGGGTGGAAGCCTTGTCTTTACTTTGCTAGAGGGTACTGTAAAAATGGGACTAGTTGTAGGTTCCTTCAAGTAGGACTTGGAGATGGTGATGGTACTACAATTGTTGGGTCTCCATACAAGATTGAGATGATGGATCAGTGTCATGAGGTCTTCAGATCTAAGTCTGCTCAACAACAACAACAAAGATTGGCTGCTGCTTCTCAGCTCATGGCCTCTTCCTCTTTTATACTCACCAAAGTGCATGAATTTCCTCTTACAGCAGCAACAAAATGA 831 0.4308 MIPLWFVIPTRLPVRDLPFIYVIPKSFRLGIFPVHLVRASIVHASGLAQDDEDNNWCYKLRNWHICMKAVAKDPSGKYKVFYFNLIVGSSTSSSSLPFYANGASDPIGDFQLQDQLSFLNDDSPTLGHNKNLDLFYPPPHSDLSSSLTATADPSLFPSFGWGGSLHRRSCSVNDACLGSEDPNSGLGWKPCLYFARGYCKNGTSCRFLQVGLGDGDGTTIVGSPYKIEMMDQCHEVFRSKSAQQQQQRLAAASQLMASSSFILTKVHEFPLTAATK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi126g00055 276 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 90 260 - -
Sebi126g00055 276 ProSiteProfiles Zinc finger C3H1-type profile. 185 208 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi126g00055 Sebi-Chr126 1432498 1434539 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sebi126g00055 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi126g00055 - - gmx:100801807 262.307