Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi126g00054 ATGTTCACTAATTCACACCAAGTAATGAGAACCTTACTATCATCACCTTTGTCAGAGCCAGACCTCTCCTTAAACATTAGCCCTCCCTCTATTTCAGAAGCCAAAGATGTTGTGTGCTCATCAACCTCTGATTCAGGGAGTAGTGGAAGTGAGTTAAGCCATGAGAATATTGGGTTTTTCCATCGTCAACACACCACACTGAGATTAGGCTTTGCAGATTTGAATCATCATCATCCTCATTCACTACAAGGAGCCTCAACAAGAAACTTCAACCACCATCTCCAACCTCAAATCTATGGACGAGATTTCAAACGAAATGCAAGGGTCAACATGAATGGTGTGAAAAGAAGTGTCAGAGCTCCTAGGATGAGATGGACAACCACCCTCCATGCCCATTTTGTTCATGCCGTTCAGCTTCTTGGTGGCCATGAAAGGGCAACACCAAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGGTGGGGTTACTATTCCCATATCTCCATATTCACCATAGTCTTTGA 555 0.4324 MFTNSHQVMRTLLSSPLSEPDLSLNISPPSISEAKDVVCSSTSDSGSSGSELSHENIGFFHRQHTTLRLGFADLNHHHPHSLQGASTRNFNHHLQPQIYGRDFKRNARVNMNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQVGLLFPYLHIHHSL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi126g00054 184 NCBIfam myb-like DNA-binding domain, SHAQKYF class 121 171 IPR006447 GO:0003677
Sebi126g00054 184 FunFam Myb family transcription factor 119 174 - -
Sebi126g00054 184 Gene3D - 120 174 - -
Sebi126g00054 184 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 170 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sebi126g00054 184 SUPERFAMILY Homeodomain-like 118 171 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi126g00054 Sebi-Chr126 1388104 1389037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi126g00054 10 171 G2-like Transcription Factor Family AT5G42630 60.241 4.90e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi126g00054 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi126g00054 - - gmx:100778242 232.646