Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi126g00051 ATGGAATCCAAACATGAAATCATTGAGGATGATGATGTCCATGAAGAATGGGTTGTGGATCTGTTTGAAGCTCAAGCATTTGGAGATCAGGCTTTGGGAGTTCCAACAAGGATCAGGCGAGGTTGGTTTGGCCATGGACCAACGCAAATCTTGGTTTGCATTGAAGGAAAAGAGCCTGCCCAGACATGGGAGTTATCGTGGTACAATGAAGGAAAGCAATGCCTTATAGGAAAGGGATGGTATGCATTTTGTCGGGATAATGCCCTGTCTGCAGGTGATGTTGTCACTTTTGTGAAATGCAGAGGTGTGGAAGAATTGTTGGTAGTGCTTGATCGTTTAGATGGTTGA 348 0.4454 MESKHEIIEDDDVHEEWVVDLFEAQAFGDQALGVPTRIRRGWFGHGPTQILVCIEGKEPAQTWELSWYNEGKQCLIGKGWYAFCRDNALSAGDVVTFVKCRGVEELLVVLDRLDG 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi126g00051 115 Gene3D - 4 111 IPR015300 -
Sebi126g00051 115 SUPERFAMILY DNA-binding pseudobarrel domain 31 109 IPR015300 -
Sebi126g00051 115 Pfam B3 DNA binding domain 34 102 IPR003340 GO:0003677
Sebi126g00051 115 ProSiteProfiles B3 DNA-binding domain profile. 17 114 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi126g00051 Sebi-Chr126 1253336 1253966 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi126g00051 B3 2.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi126g00051 - K09287 jcu:110009416 45.4394