Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi126g00029 ATGGGGCCTTCTGCAGCATTCCTTTACACCTGCAATGGCCTAAACAAATCCTGCATGGCCTTCCTCATCTTCAAATCTCAACCTCTTTACAATACCATCCCCACAATTTCCAACCTCACATCATCAAACCCTGAAGAACTAGCCAGAATCAATGGTGCCACTTTGCTCACAGTGTTCCCAACTGGAAAAGAGGTTATTGTCCCTGTGAATTGTTCTTGTTTAACCAGGGATTATTACCAAGCTGATACCAAATACATACTGGGACCAAACCCAACATACTTCACAGTTGCTAATGATACTTTTCAGGGTTTAGCCACTTGTGATTCTCTCAAGCATGCCAATCCATATGGGGAACTTGATTTGCATCCTGGCATGGAATTGCATGTGCCACTCAGATGTGCTTGTCCAACATGGAATCAAACCACAAAGGGCACCAAGTATTTGCTTACATATTCAGTGAACTGGGGTGATAACATTCAGAATATTGCTACAAGATTCAATGTAGCAGCAGGTAATCTACTTGATGCTAATGGTTTTTCCACACAAAGAGAAACTCTTTTTCCATTCACAACTATTCTGATTCCTTTGCCAAGTGAACCAGTGAGTTCAACTACCATAGTTGCTAATGACCCACCAGCCATGTCACCTACTCCTGTTTGCAGCTATAAAAAGTGCAGGTCAAAGAGAAAACTCCACATTGCTGTTGTTACTACAGGGGTTTCCATGCTGGTTCTGTGTGTCATTTTATCTGCTGTGTTTCTGATTCTGCTCAGAAAGAGATCAGCAAGGTTCTTTAAGCGAGGAACAGAAGGTAAGAAAAAAAAGGGGGTGTCTGCAGAAGATATCCGTGAGGAGATAGCAATCATTGAACATCTCTCCAAAGTGTACAGATTTGAGGAAATAAAGGAAGCGACTGAAAATTTTAGTTCAAAGAATAGAATTAAAGGTTCTGTATTTCGTGGGGTATTTGGCAATGGCAAGGACATATTGGCTGTCAAAAGAATGAGGGGAGATGCGTCCAAGGAAGTCAATTTGCTGAAAAAGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACTATGGCTGCCACTATCTTGTTTATGAATACATGGAAAATGGCTCTTTAAGAGAATGGCTTAGCAAAAACAGGTCCATGGAGCACCAGAGTTGGGAAAAGAGGATTCAGATTGCTCTGGATATTGCCAATGGACTTCAGTATCTTCACAACTTCACAGAACCTTGTTATGTGCACAAGGGCATAAACAGTGGAACTATTCTACTAAACAAAGATCTCAGGGCCAAGCTAGCTAATTTTGCTCTTGCTGAAGAATCAGAAAGGATAATAACTTCTGGTTGCCCCACATCACATGTTGTGGGATCCAGGGTTTATTTGGCTCCAGAGTATCTGGAGGCAGGGATAGTCACAACCAAAATGGATGTTTATGCCTTTGGATTGGTGCTTTTGGAATTGATCACGGGCAAAGATTCTTTTACCCTGCAAGATGGAAGAGAAGTAATGCTTCATGCAATCATAGCAAATCTCATTGGTAAAGAGAATGAAGAAGAGAAGGTGAGTTTGTTCATTGATCCTAGCCTCATGGGAAACTGTGGGAAAGTATGTGCACTCCAGCTAGTTAAACTAAGTCTAGCTTGCTTGATCCAAGAACCAGAAAGGAGACCAAACATGGCAGAGGTAGTTTCTAGCTTATTGAAAATACAGGCAAATGATATGCACCAACGAATACCACCCAGCATCAATAAAAGTTTAGGCCTGGAGAGGTGA 1794 0.4147 MGPSAAFLYTCNGLNKSCMAFLIFKSQPLYNTIPTISNLTSSNPEELARINGATLLTVFPTGKEVIVPVNCSCLTRDYYQADTKYILGPNPTYFTVANDTFQGLATCDSLKHANPYGELDLHPGMELHVPLRCACPTWNQTTKGTKYLLTYSVNWGDNIQNIATRFNVAAGNLLDANGFSTQRETLFPFTTILIPLPSEPVSSTTIVANDPPAMSPTPVCSYKKCRSKRKLHIAVVTTGVSMLVLCVILSAVFLILLRKRSARFFKRGTEGKKKKGVSAEDIREEIAIIEHLSKVYRFEEIKEATENFSSKNRIKGSVFRGVFGNGKDILAVKRMRGDASKEVNLLKKINHFNLIKLQGYCENYGCHYLVYEYMENGSLREWLSKNRSMEHQSWEKRIQIALDIANGLQYLHNFTEPCYVHKGINSGTILLNKDLRAKLANFALAEESERIITSGCPTSHVVGSRVYLAPEYLEAGIVTTKMDVYAFGLVLLELITGKDSFTLQDGREVMLHAIIANLIGKENEEEKVSLFIDPSLMGNCGKVCALQLVKLSLACLIQEPERRPNMAEVVSSLLKIQANDMHQRIPPSINKSLGLER 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi126g00029 597 Gene3D Phosphorylase Kinase; domain 1 269 373 - -
Sebi126g00029 597 Gene3D Transferase(Phosphotransferase) domain 1 374 590 - -
Sebi126g00029 597 Pfam LysM domain 151 195 IPR018392 -
Sebi126g00029 597 FunFam PTI1-like tyrosine-protein kinase 3 374 585 - -
Sebi126g00029 597 SUPERFAMILY Protein kinase-like (PK-like) 298 586 IPR011009 -
Sebi126g00029 597 SUPERFAMILY LysM domain 149 195 IPR036779 -
Sebi126g00029 597 Pfam Protein tyrosine and serine/threonine kinase 337 573 IPR001245 GO:0004672|GO:0006468
Sebi126g00029 597 Gene3D LysM domain 137 205 IPR036779 -
Sebi126g00029 597 ProSiteProfiles Protein kinase domain profile. 259 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi126g00029 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 580 - -
Sebi126g00029 597 ProSiteProfiles LysM domain profile. 149 194 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi126g00029 Sebi-Chr126 793644 795437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi126g00029 4 578 Receptor kinase-like Gene Family AT2G23770 38.591 1.41e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi126g00029 PK_Tyr_Ser-Thr 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi126g00029 - - gmx:100806221 915.22