Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi125g00018 ATGCCGACCCGATCAACTGGAGCCATGACCCAGGACTGGAAGCCGGTGGTGCTGCACAAGTCGAAGCCCAAGGCGCAGGACCTGCGGAACCCCAAGGCCGTGAACCAGGCGCTTCGAACCGGTGCGGAGGTGACGACGGTGAAGAAGTTCGACGCCGGTTTGAACAAGAAAACCAGCGGTCCGGTCGTGAACGCGAGGAAGCTGGACGAAGGGACCGAACCGGCAGCGCTGGAGCGAGTGGCGGGAGAGGTGCGTCACACGATACAGAAGGCGCGTTTGGAGAAGAAGATGAGCCAGGCTGAGCTGGCCAAACAGATCAATGAACGAGTGCAAGTGGTACAGGAATACGAGAATGGTAAAGCGGTGCCCAACCAGGCCGTGCTTGCCAAGATGGAGAGGGTCCTTGGAGTGAAGCTTAGGGGTAAAATTGGAAAGTGA 438 0.5868 MPTRSTGAMTQDWKPVVLHKSKPKAQDLRNPKAVNQALRTGAEVTTVKKFDAGLNKKTSGPVVNARKLDEGTEPAALERVAGEVRHTIQKARLEKKMSQAELAKQINERVQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKIGK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi125g00018 145 CDD HTH_XRE 88 139 IPR001387 -
Sebi125g00018 145 SUPERFAMILY lambda repressor-like DNA-binding domains 85 139 IPR010982 GO:0003677
Sebi125g00018 145 Pfam Multiprotein bridging factor 1 11 80 IPR013729 -
Sebi125g00018 145 FunFam Multiprotein bridging factor 1 72 145 - -
Sebi125g00018 145 ProSiteProfiles Cro/C1-type HTH domain profile. 88 142 IPR001387 -
Sebi125g00018 145 Pfam Helix-turn-helix 88 139 IPR001387 -
Sebi125g00018 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 142 - -
Sebi125g00018 145 Coils Coil 88 108 - -
Sebi125g00018 145 Gene3D - 71 145 IPR010982 GO:0003677
Sebi125g00018 145 SMART mbf_short4 87 142 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi125g00018 Sebi-Chr125 691743 692180 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Sebi125g00018 MBF1 7.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi125g00018 K03627 - qsa:O6P43_004045 238.039