Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi125g00017 ATGATGAAATGGGCAGAGTTAATTGATCAAAACATAGAAGAAATAGCAGCATTAGATGCCATTGATGCTGGAAAGTTGTATCATCGGGTCAAGGCTATTGAAATTCCATCAGCAGCAAATACTATACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTTAGCCCTTCCCTGGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCTGAACAAACACCTCTCTCAGCTTTGTTTTATGCTCATCTAGCTAAGCTGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCCAAATTGCAGGTGCTGCAATAAGCTCCCACATGGATATTGATAAGGTCAGCTTTACTGGTTCAACAGAAGTAGGCAGAGAAATAATGCAAGCTGCTGCTAGGAGTAATCTGAAAACAGTTTCACTTGAACTAGGAGGCAAGTCACCACTTCTAATATTTGATGATGCTGATGTGGATAAAGCTGTTGAGCTTGCTCTCTTGGGGGTAGTGTATAACAAGGGAGAAATTTGTGTTGCTGGTTCGCGTGTATTTGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCCTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAGCAATTTGAGAAAATTCTTTCCTACATTGAACATGGAAAAAGAGAAGGGGCCACCCTTCTGACAGGTGGCAATAGAGTGGGCAACAAGGGCTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTTATTGCACAAGATGAAATATTTGGTCCTGTGATGGCCCTGATGAAGTTTAAGACCATGGAGGAAGCAATTAAAAGTGCTAACAACACCAGATATGGCTTAGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACTGTGTCAAGGTCAATTCGTGCTGGCATTATTTGGATCAACTGTTATTTTGCCTTTGGAAATGACATTCCTTATGGAGGTTATAAGATGAGTGGATTTGGAAGAGAGTTTGGAATGGAAGCCCTTTACAAATACTTACAAGTTAAATCTGTTGTAACACCCATTTACAATTCTCCTTGGCTTTGA 1137 0.4186 MMKWAELIDQNIEEIAALDAIDAGKLYHRVKAIEIPSAANTIRYYAGAADKIHGEVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQIAGAAISSHMDIDKVSFTGSTEVGREIMQAAARSNLKTVSLELGGKSPLLIFDDADVDKAVELALLGVVYNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGNRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFKTMEEAIKSANNTRYGLAAGIVTKSLDTANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGREFGMEALYKYLQVKSVVTPIYNSPWL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi125g00017 378 FunFam Aldehyde dehydrogenase, putative 340 366 - -
Sebi125g00017 378 FunFam Aldehyde dehydrogenase3 148 337 - -
Sebi125g00017 378 Pfam Aldehyde dehydrogenase family 56 368 IPR015590 GO:0016491
Sebi125g00017 378 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 147 IPR016162 GO:0016491
Sebi125g00017 378 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 148 373 IPR016163 GO:0016620
Sebi125g00017 378 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 57 IPR016162 GO:0016491
Sebi125g00017 378 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 172 183 IPR016160 GO:0016491
Sebi125g00017 378 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 144 151 IPR029510 GO:0016491
Sebi125g00017 378 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 56 368 - -
Sebi125g00017 378 SUPERFAMILY ALDH-like 2 374 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi125g00017 Sebi-Chr125 649182 651381 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi125g00017 3 378 Aldehyde Dehydrogenase Gene Family AT3G24503 67.554 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi125g00017 K12355 - gmx:100783920 677.167