Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi125g00011 ATGACTGGTCTCTCCAACGGCCACGCCGGTTCCTCGTTCGAGCTACCAACCATCAAATTCACCAAGCTCTTCATCAATGGCCAATTCGTTGATTCCCTTTCAGGGAAGGAGTTTGAGACAATAGATCCGAGGACAGGAGAGGTGATTGCGAGGATTGCAGAGGCAGGAAAAGAAGATATTGACGTTGCTGTGAAAGCGGCACGTGTCGCTTTCGATGATGGTCCATGGCCTCGCTTGCCCGGAACTGAAAGAGCACGAATTATGATGAAATGGGCAGACCTAATTGATCAAAACATAGAAGAAATAGCAGCATTAGATACAATTGATGCCGGAAAGTTATACCATTGGTGCAAAGCTGTTGACATTCCTGCAGCAGCAAGTACTATACGCTACTATGCTGGTGCTGCTGATAAAATCCATGGAGAGGTCTTAAAACCATCTAGGGAGTTGCATGCATATACTTTGCTGGAACCAATTGGTGTTGTGGGACACATTATTCCCTGGAATTTCCCTAGCACCATGTTTGTTGCCAAGGTTGGTCCTTCTCTGGCTGCAGGATGCACAATAGTTATCAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTATTACGCTCATCTAGCTAAGCTGGCTGGAATTCCAGATGGAGTGCTCAATGTTGTGCCCGGGTTTGGCCCAACTGCAGGGGCTGCAATAAGCTCACACATGGACATTGATAAGATCAGCTTTACTGGTTCAACAGAAGTAGGCCGTGAAATAATGCAAGCTGCAGCTAAGAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGGAAATCACCTTTCATAGTGTTTGATGATGCTGATGTGGATAAAGCTGCTGAACTTGCTCTCTTGGGCATCCTATTTAATAAGGGAGAAATTTGTGTAGCAGGTTCCCGTGTGTTTGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGGGATCCTTTTGATCCTAAAAGTCAACAAGGGCCTCAGGTTGACAAGAGGCAATTTGAAAAAATCCTTTCCTATATTGAGCATGGAAAGAGAGAAGGGGCCACCCTTTTGACAGGTGGTAAAAGAGTGGGCAACAAGGGTTACTACATTGAGCCTACTATTTTCTCCAATGTTAAGGTGAATTTTAGCTCCACAAAAGTATTAAACAGGGTGTCTTCAGAATATTCAGATAACTAA 1230 0.4423 MTGLSNGHAGSSFELPTIKFTKLFINGQFVDSLSGKEFETIDPRTGEVIARIAEAGKEDIDVAVKAARVAFDDGPWPRLPGTERARIMMKWADLIDQNIEEIAALDTIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKPSRELHAYTLLEPIGVVGHIIPWNFPSTMFVAKVGPSLAAGCTIVIKPAEQTPLSALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDKISFTGSTEVGREIMQAAAKSNLKPVSLELGGKSPFIVFDDADVDKAAELALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKRQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKVNFSSTKVLNRVSSEYSDN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi125g00011 409 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 292 - -
Sebi125g00011 409 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Sebi125g00011 409 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 392 - -
Sebi125g00011 409 FunFam Aldehyde dehydrogenase3 271 402 - -
Sebi125g00011 409 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Sebi125g00011 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 391 IPR016163 GO:0016620
Sebi125g00011 409 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 270 IPR016162 GO:0016491
Sebi125g00011 409 Pfam Aldehyde dehydrogenase family 30 391 IPR015590 GO:0016491
Sebi125g00011 409 SUPERFAMILY ALDH-like 16 392 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi125g00011 Sebi-Chr125 522970 529787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi125g00011 4 389 Aldehyde Dehydrogenase Gene Family AT3G24503 71.722 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi125g00011 K12355 - gmx:100783920 712.99