Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00132 ATGATTTTAGCAATTGCGGCTGCAGCCCTGTGTGCGTACATTGCCCCTGCAGCAGCAGGGTCTGGCATCCCTGAGGTGAAAGCATACCTCAATGGTATAGATGCACACACTATACTGGCTCCAAGTACCCTATTTGTAAAGATTTTTGGTTCAATTTTTGGTGTTGCGGCGGGATTTGTTGTGGGTAAAGAAGGACCTATGGTTCATACGGGTGCTTGCGTAGCTAATTTACTTGGACAAGGCGGTTCTCGAAAATATGGCCTGACATGGAAATGGCTTAGATACTTCAAAAATGACAGAGATCGAAGGGATTTGATCACATGTGGTGCAGCTGCTGGTGTTGCTGGTGCCTTTCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGCACTTTCTTCACAACGGCTGTAGTAGCTGTAGTGCTGAGAGCTCTAATACAAGTGTGTGAGGGAGGAAAATGTGGTCTTTTTGGGAAAGGAGGTCTCATAATGTTTGATGTTAATTCAGCGAAGCCTGTGTACAACATACCTGACCTACTCGTAGTTATATTTCTTGGAGTTATAGGAGGTCTTATGGGAAGCCTTTACAATTTTCTCGTGGATAAGGTCCTTCGCACTTACAGTCTTATAAATGAGAGAGTCCCAATATTCAAAATTCTAGTTGTGATGATCATCTCCCTTGTGACGTCTAGTATTCGGTTCGGCCTTCCATTGTTATCAAAGTGCATCCCTTGTCCTGGGCCAGAGGGGGATCAGTGCCCAAGCCCAACTGTAGGGTTCTTCTCAATACACTACAAGAATTTTCAATGTCCACCTAACCACTACAATGACCTTACCTCTCTTTTTTTCACCACTAACGATGATGCTATTCGTAACCTATTCATTGCTGGATCTGACAATAGGTTTCAAATTTCTAGTCTTGTAATTTTCTTTGTGGCCATATACTCCCTTGGAATCATCACTTATGGTGTTGCCATTCCCTCTGGGCTCTTTATTCCTGTCATACTTGCTGGAGCTTCCTATGGGCGCCTTGTAGGGAGTCTCTTAAGTCCATTCACTGTTCTTGATGCGGGATTGTTTGCCCTCCTTGGAGCTGCATCCTTTCTCGGCGGTTCCATGAGAATGACTGTTTCCCTCTGCATCATACTTCTTGAGCTCACAAATGACCTATTGATGCTCCCCTTGGTCATGCTGGTTCTCCTCATTTCAAAGTCTGTAGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGAAATTAAGGGGCTACCTTATATGGAGGCACATGCAGAGCCATATATGAGGCATTTAGCTGCTAGTGATGTTGTTTCTGGCCCCTTGTTTACATTTTCTGGGGTTGAAAAAGTGGGTAATATTGTGCATGCCTTAAAGATCACACGACATCATGGGTTTCCTGTAATTGACGAGCCTCCTTTCTCGGATGCGCCTGAGTTGTGTGGATTGGTATTAAGGTCACACCTGCTTGTACTTCTTAAGAATAGGACATTCTCGAGGCAGAGGGTGATGACAGGGTCTACCATTATGAGGAGGTTTAAGGCACATGATTTTGCAAAGCCAGGTTCAGGCAAGGGGCTAAAGCTAGAGGATTTAGATATTACACAAGACGAAATGGAAATGTTTGTTGATCTTCATCCAATTACTAATACCTCGCCATATACTGTAGTGGAAACAATGTCTCTTGCAAAAGCTGCTATTCTTTTTCGTGAGCTTGGCCTTAGGCACTTGTTGGTTGTGCCCAAGACACCAGGAAGGCCTCCAATTGTTGGGATCCTGACAAGGCATGACTTCATGCCTGAGCATGTCCTGGGATTATTCCCTCACTTGAAACCCCACAAGTAG 1902 0.4469 MILAIAAAALCAYIAPAAAGSGIPEVKAYLNGIDAHTILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACVANLLGQGGSRKYGLTWKWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRALIQVCEGGKCGLFGKGGLIMFDVNSAKPVYNIPDLLVVIFLGVIGGLMGSLYNFLVDKVLRTYSLINERVPIFKILVVMIISLVTSSIRFGLPLLSKCIPCPGPEGDQCPSPTVGFFSIHYKNFQCPPNHYNDLTSLFFTTNDDAIRNLFIAGSDNRFQISSLVIFFVAIYSLGIITYGVAIPSGLFIPVILAGASYGRLVGSLLSPFTVLDAGLFALLGAASFLGGSMRMTVSLCIILLELTNDLLMLPLVMLVLLISKSVADCFNKGVYDQIVEIKGLPYMEAHAEPYMRHLAASDVVSGPLFTFSGVEKVGNIVHALKITRHHGFPVIDEPPFSDAPELCGLVLRSHLLVLLKNRTFSRQRVMTGSTIMRRFKAHDFAKPGSGKGLKLEDLDITQDEMEMFVDLHPITNTSPYTVVETMSLAKAAILFRELGLRHLLVVPKTPGRPPIVGILTRHDFMPEHVLGLFPHLKPHK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00132 633 PRINTS Plant CLC chloride channel signature 146 156 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00132 633 PRINTS Plant CLC chloride channel signature 291 307 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00132 633 PRINTS Plant CLC chloride channel signature 164 171 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00132 633 PRINTS Plant CLC chloride channel signature 132 140 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00132 633 SMART cbs_1 460 513 IPR000644 -
Sebi124g00132 633 SMART cbs_1 571 622 IPR000644 -
Sebi124g00132 633 Gene3D Clc chloride channel 1 439 - -
Sebi124g00132 633 Pfam CBS domain 569 617 IPR000644 -
Sebi124g00132 633 SUPERFAMILY Clc chloride channel 2 442 IPR014743 -
Sebi124g00132 633 PRINTS Chloride channel signature 16 33 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 111 130 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 427 441 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 339 359 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 389 408 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 47 66 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 PRINTS Chloride channel signature 371 387 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 Pfam Voltage gated chloride channel 4 421 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00132 633 Gene3D - 440 623 IPR046342 -
Sebi124g00132 633 ProSiteProfiles CBS domain profile. 567 631 IPR000644 -
Sebi124g00132 633 CDD CBS_pair_voltage-gated_CLC_euk_bac 453 620 - -
Sebi124g00132 633 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 623 - -
Sebi124g00132 633 SUPERFAMILY CBS-domain pair 444 618 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00132 Sebi-Chr124 1503075 1505520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00132 1 633 Ion Channels AT5G49890 78.707 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00132 K05016 - jre:108988922 994.186