Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00130 ATGATTTTAGCAATTGCGGCTGCAGCCCTGTGTGCGTACATTGCCCCTGCAGCAGCAGGGTCTGGCATCCCTGAGGTGAAAGCATACCTCAATGGTATAGATGCACACACTATACTGGCTCCAAGTACCCTATTTGTAAAGATTTTTGGTTCAATTTTTGGTGTTGCGGCGGGATTTGTTGTGGGTAAAGAAGGACCTATGGTTCATACGGGTGCTTGCGTAGCTAATTTACTTGGACAAGGCGGTTCTCGAAAATATGGCCTGACATGGAAATGGCTTAGATACTTCAAAAATGACAGAGATCGAAGGGATTTGATCACATGTGGTGCAGCTGCTGGTGTTGCTGGTGCCTTTCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGCACTTTCTTCACAACGGCTGTAGTAGCTGTAGTGCTGAGAGCTCTAATACAAGTGTGTGAGGGAGGAAAATGTGGTCTTTTTGGGAAAGGAGGAGGTCTTATGGGAAGCCTTTACAATTTTCTCGTGGATAAGGTCCTTCGCACTTACAGTCTTATAAATGAGAGAGTCCCAATATTCAAAATTCTAGTTGTGATGATCATCTCCCTTGTGACGTCTAGTATTCGGTTCGGCCTTCCATTGTTATCAAAGTGCATCCCTTGTCCTGGGCCAGAGGGGGATCAGTGCCCAAGCCCAACTGTAGGGTTCTTCTCAATACACTACAAGAATTTTCAATGTCCACCTAACCACTACAATGACCTTACCTCTCTTTTTTTCACCACTAACGATGATGCTATTCGTAACCTATTCATTGCTGGATCTGACAATAGGTTTCAAATTTCTAGTCTTGTAATTTTCTTTGTGGCCATATACTCCCTTGGAATCATCACTTATGGTGTTGCCATTCCCTCTGGGCTCTTTATTCCTGTCATACTTGCTGGAGCTTCCTATGGGCGCCTTGTAGGGAGTCTCTTAAGTCCATTCACTGTTCTTGATGCGGGATTGTTTGCCCTCCTTGGAGCTGCATCCTTTCTCGGCGGTTCCATGAGAATGACTGTTTCCCTCTGCATCATACTTCTTGAGCTCACAAATGACCTATTGATGCTCCCCTTGGTCATGCTGGTTCTCCTCATTTCAAAGTCTGTAGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGAAATTAAGGGGCTACCTTATATGGAGGCACATGCAGAGCCATATATGAGGCATTTAGCTGCTAGTGATGTTGTTTCTGGCCCCTTGTTTACATTTTCTGGGGTTGAAAAAGTGGGTAATATTGTGCATGCCTTAAAGATCACACGACATCATGGGTTTCCTGTAATTGACGAGCCTCCTTTCTCGGATGCGCCTGAGTTGTGTGGATTGGTATTAAGGTCACACCTGCTTGTACTTCTTAAGAATAGGACATTCTCGAGGCAGAGGGTGATGACAGGGTCTACCATTATGAGGAGGTTTAAGGCACATGATTTTGCAAAGCCAGGTTCAGGCAAGGGGCTAAAGCTAGAGGATTTAGATATTACACAAGACGAAATGGAAATGTTTGTTGATCTTCATCCAATTACTAATACCTCGCCATATACTGTAGTGGAAACAATGTCTCTTGCAAAAGCTGCTATTCTTTTCGTGAGCTTGGCCTTAGGCACTTGTTGGTTGTGCCCAAGACACCAGGAGTAA 1731 0.4477 MILAIAAAALCAYIAPAAAGSGIPEVKAYLNGIDAHTILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACVANLLGQGGSRKYGLTWKWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRALIQVCEGGKCGLFGKGGGLMGSLYNFLVDKVLRTYSLINERVPIFKILVVMIISLVTSSIRFGLPLLSKCIPCPGPEGDQCPSPTVGFFSIHYKNFQCPPNHYNDLTSLFFTTNDDAIRNLFIAGSDNRFQISSLVIFFVAIYSLGIITYGVAIPSGLFIPVILAGASYGRLVGSLLSPFTVLDAGLFALLGAASFLGGSMRMTVSLCIILLELTNDLLMLPLVMLVLLISKSVADCFNKGVYDQIVEIKGLPYMEAHAEPYMRHLAASDVVSGPLFTFSGVEKVGNIVHALKITRHHGFPVIDEPPFSDAPELCGLVLRSHLLVLLKNRTFSRQRVMTGSTIMRRFKAHDFAKPGSGKGLKLEDLDITQDEMEMFVDLHPITNTSPYTVVETMSLAKAAILFVSLALGTCWLCPRHQE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00130 576 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 173 567 - -
Sebi124g00130 576 Gene3D Clc chloride channel 1 413 - -
Sebi124g00130 576 SUPERFAMILY Clc chloride channel 2 414 IPR014743 -
Sebi124g00130 576 Pfam Voltage gated chloride channel 4 393 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 16 33 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 361 380 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 343 359 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 311 331 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 47 66 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 399 413 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 PRINTS Chloride channel signature 111 130 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sebi124g00130 576 CDD CBS_pair_voltage-gated_CLC_euk_bac 425 565 - -
Sebi124g00130 576 PRINTS Plant CLC chloride channel signature 146 156 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00130 576 PRINTS Plant CLC chloride channel signature 164 171 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00130 576 PRINTS Plant CLC chloride channel signature 132 140 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sebi124g00130 576 SUPERFAMILY CBS-domain pair 416 566 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00130 Sebi-Chr124 1473617 1475734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00130 1 573 Ion Channels AT5G49890 73.754 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00130 K05016 - zju:107425381 826.239