Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00125 ATGGGTGCAATGTGGCAATCTGTGTCCCCTAAAGTTAATGAATGGATGAAGGGTAAAGTGGTTGGATGTGGATCTTTTGGCACTGTCCATTTGGCCATGAACAAATCCACCGGTGGACTCTTCGTTGTGAAATCATCACATTCAGGGGCTGGGTGTGAGGCTTTGGATAATGAGGTCAGAATTCTAAAGACTCTAAAATCATCACCGTACATTGTCCAATGTTTAGGGACAGAGGAGGAGGAGGAAGATATATGGTCTTTGGGATGTACAGTCATTGAAATGGCTACTGGTAACCCTCCTTGTTGGGCTGAAGAGGGTTCAGATCCAAATCCCATGGCTACCATACTCAAGATTGCTCATGGAGATGGACATGGGGATGGGATACCTCAGTTTCCAACCCATTTCTCTAACCAAGGTTTGGATTTCTTGAGCAGGTGTTTGGTGAGAGAACCCAATAAGAGGAGTACGACCGAGGAGTTACTTGCTCATCCATTTGTTTCTTCAACAACTCAGAGTCAGAGTCAGAAAGAATATGCTTCCTCCCCAGCAGGTGTCTTGGAGGTTCAGGATTTTGATGAATTAGAAAGTCCACCAGGAAATGATTTCTCAATCAGAAACTCATTTTCGTACTATGATGCTCCAGAACCAATGTGGCAACTGGAGGAATTAGGGTCATCAGGGAATTGGATTACTGTTAGGTGA 702 0.4444 MGAMWQSVSPKVNEWMKGKVVGCGSFGTVHLAMNKSTGGLFVVKSSHSGAGCEALDNEVRILKTLKSSPYIVQCLGTEEEEEDIWSLGCTVIEMATGNPPCWAEEGSDPNPMATILKIAHGDGHGDGIPQFPTHFSNQGLDFLSRCLVREPNKRSTTEELLAHPFVSSTTQSQSQKEYASSPAGVLEVQDFDELESPPGNDFSIRNSFSYYDAPEPMWQLEELGSSGNWITVR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00125 233 SUPERFAMILY Protein kinase-like (PK-like) 11 179 IPR011009 -
Sebi124g00125 233 Gene3D Phosphorylase Kinase; domain 1 6 83 - -
Sebi124g00125 233 SMART serkin_6 15 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00125 233 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00125 233 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 13 80 - -
Sebi124g00125 233 Pfam Protein kinase domain 80 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00125 233 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Sebi124g00125 233 Gene3D Transferase(Phosphotransferase) domain 1 84 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00125 Sebi-Chr124 1393768 1394814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00125 14 96 MAP Kinase Kinase Kinase AT3G50310 31.034 5.64e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi124g00125 Pkinase 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00125 K20716 - pcin:129306931 155.606