Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00099 ATGTCTAGTATTGACGTAAATTTGTCTGGGATAGTGTTTGAGCAAAATGTGGTTTACAAGGAGTGTAGGCACAACCTTGCAGCAAAACACGGTCTTGTTTTCCATGATGGATGCCTAGAGTTTGTCAAAGACACCGCTAATGATGCTATGTTGTGTGTTGCTTGTGGGTGTCACCAAAACTTTCACCGCAGATACATTGTTTTCAACCCCATAGCCTTACCTCAAGTAACAGACAACAATATGAATGCAACAAGGTCGTCACTTGTGGGCCCAATTATGCAATTCCACCCCTCAGGCCCAGAGCCACCAATGAAGAAGAGGAGGACAAGGTTCACACCGGAGGAAAGGAATCAATTGGTGACTTTTGCTGAGGGGTTTGGGTGGAAACCTCAAATGGCAAACAAGGAAGAAATCCAACGTTTCTGCTCAGAGATGGGAATCACGCACAAAATATTAATGGTTTGGATCAATAACAACTGTCATCGAGCAAAACACAAGAATTAA 504 0.4325 MSSIDVNLSGIVFEQNVVYKECRHNLAAKHGLVFHDGCLEFVKDTANDAMLCVACGCHQNFHRRYIVFNPIALPQVTDNNMNATRSSLVGPIMQFHPSGPEPPMKKRRTRFTPEERNQLVTFAEGFGWKPQMANKEEIQRFCSEMGITHKILMVWINNNCHRAKHKN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00099 167 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 65 IPR006456 -
Sebi124g00099 167 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 161 - -
Sebi124g00099 167 SUPERFAMILY Homeodomain-like 98 164 IPR009057 -
Sebi124g00099 167 NCBIfam homeobox domain, ZF-HD class 105 159 IPR006455 -
Sebi124g00099 167 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 19 64 IPR006456 -
Sebi124g00099 167 Pfam ZF-HD protein dimerisation region 16 65 IPR006456 -
Sebi124g00099 167 Gene3D - 96 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00099 Sebi-Chr124 1144664 1145167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00099 11 159 ZF-HD Transcription Factor Family AT1G69600 33.333 1.96e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sebi124g00099 ZF-HD_dimer 6.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00099 - - gmx:102668663 141.354