Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00098 ATGAACCCGTTTTCCTTCATTGATCAAAGATCCATGGCTAACATTTTGATATTCATATTCTTCTCCATCATCGTCTCCATATCACCCTCTTATGGATACGATCCGTTGGATCCTTTGGGCAACATCACCATCAAATGGGATTTCTTGGCTGATAATGGAGACACAGTCGATTGCTCAAACTGCACAGTCTTAGCTCACTTTCACTCTGTCTTGGTTTGCTTCCAATCAATTGAAGCCACCTCACCAAGGCATATTCTGGTGAAGGTGTCAATATACAACTTGCAACTATTTCGCCATGTGGAAGAGCCTGGTTGGAAATTGGGTTGGGCTTGGAGGGGTAATGAGGAGCCAGTTATTATTGATCTCATGCCTGGAACCCCATACAACCTCCAGACTGCCAATTGCTGTAAAGGAGGGGTCCTAACATCCATCACTCAAGATCTTACCAAATATGGTGCCACCTTCCAGATGAATTATGCCAAATCATCACACTACATTCCAGGTGCCTCCAATTTTAGCATGCCTGAAAATTTCACCCTTGGAATTCCTGGTTATAGCTGTGGCACACCATTTCAAGTCCCACCAACCAAGTTCACCAAAGATGGACACCGATGGCAGCAAGTCTTAGAGACGTGGAATGTGACCTGTATTTACTCCCAGTTTCTAGCATCACCAGCCCCAAAATGCTGTGTCTCCTTGTCTTCATTCTATAATAGTTCCATTGTTCCTTGCCCCCATATGCAGCTTGTTGCAAACTGCCACAAAGCGCATGAGGCTGAGACTGTGGTGAGGTGTACACATCACATGTGCCCCATTCGTGTTCACTGGCATGTGAAACAAAGTTATAAAGAGTATTGGAGGGTGAAGATCACAATCACAAATCTGAACTTGGTCAAAAACTACTCCCAGTGGAATTTGGTGGTTTACACCCTAACTTGCGAAGGTGCTGATGACTTGTTTTTGTTGTTTTGTATTGAATTATATCATCAAGATGATACAGGGATGTTTTGGGGGTTAGAGTACTACAATGACTTGTTGCTGGCACATGGGGACAATGGGAAGGTACAAACAGAAGTGTTACTGCACAAAGATCGAGGAGAATTCACTTTCAAAGAAGGATGGACTTTTCCAAGAAAAATTTCATTTAATGGTGATGAGTGTGTCATGCCATCTCCTGACGCGTACCCTAGGCTCCCCAACACAGCTATGGCCACAACTACAACAACCCCTATCATATTTTTCTCCTCAATGTCACTGGCTATTCTCTCAATATTGGTCTAG 1281 0.4364 MNPFSFIDQRSMANILIFIFFSIIVSISPSYGYDPLDPLGNITIKWDFLADNGDTVDCSNCTVLAHFHSVLVCFQSIEATSPRHILVKVSIYNLQLFRHVEEPGWKLGWAWRGNEEPVIIDLMPGTPYNLQTANCCKGGVLTSITQDLTKYGATFQMNYAKSSHYIPGASNFSMPENFTLGIPGYSCGTPFQVPPTKFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSSFYNSSIVPCPHMQLVANCHKAHEAETVVRCTHHMCPIRVHWHVKQSYKEYWRVKITITNLNLVKNYSQWNLVVYTLTCEGADDLFLLFCIELYHQDDTGMFWGLEYYNDLLLAHGDNGKVQTEVLLHKDRGEFTFKEGWTFPRKISFNGDECVMPSPDAYPRLPNTAMATTTTTPIIFFSSMSLAILSILV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00098 426 PIRSF COBRA 5 69 IPR006918 GO:0010215|GO:0016020
Sebi124g00098 426 PIRSF COBRA 113 426 IPR006918 GO:0010215|GO:0016020
Sebi124g00098 426 PIRSF COBRA 69 116 IPR006918 GO:0010215|GO:0016020
Sebi124g00098 426 PANTHER PROTEIN COBRA 20 115 IPR006918 GO:0010215|GO:0016020
Sebi124g00098 426 Pfam COBRA-like protein 87 115 IPR006918 GO:0010215|GO:0016020
Sebi124g00098 426 Pfam COBRA-like protein 115 219 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00098 Sebi-Chr124 1127793 1130365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00098 11 399 COBRA Gene Family AT1G09790 44.570 3.23e-126 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00098 - - lang:109329241 518.464