Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00095 ATGGATAGTGAGGGTCACATTCCCCCAAAGCCTCCATGCTGCAAGGGTTCTGAAAATGAAGAAGCAGTTTTCTTGCATGGTGACTTGGATCTGTGGATATTAGAAGCAAAGTCTCTTCCCAATTTGGATTTTCCGACGGAAGCAGTGCGGAAATATTTCACGATGGGCAACAGTCGCTCGGGACTGAAGAAATACTCTGGCAAATACAAAATGATAACCAGTGATCCTTACGTCTCTGTCTGCCTCGCCGGTGCCACCGTTGCTCAAACCAGAGTCATTTCCAATTGTGAGAACCCTTTATGGGATGAGCATTTTCTTGTCCCTGTCGCTCACCCTGCTCGCAAATTGGAGTTCCTTGTCAAAGACGACGACATTCTTGGAGCCCAACTCATTGGTGTGGTCGACATTTCTGTCAACAAGATTCTCTCCGGAAATTTTATCAATGATTGGTTTCCCATCATTGGCCATTATGTAAGCTACTTGAGACCTTATCCTGAGCTGCATGTATATGTTCAGTTTAGACCTGTTACTGTTGGAGTGACCCCTCCTTTTCCAGAATCAGAGGATTATGAGGATCTGGCTGTTCCTAATACATATTTTCCTGTTCGAAAAGGAGGGAGTGTGACTCTATATCAAGATGCACATGTACCAGATGATGATAAGCTACCTGAAATTCCACTTGAGGGTGGAAAGCTATTTCAGCATGGTAAATGTTGGGAGGAGATATGCCATGCCATTTCCGAAGCTCACCACCTGATTTATATTATAGGGTGGTCAGTTTACCACCCAGTGAAGCTTATCAGAGAGCCAACAAAACCTTTGCCCTCTGGTGGAGACCTTTCACTTGGAGAGTTGTTGAAATACAAGTCACAAGAAGGGGTCGTGGGAACCCTTTTTACGCATCATCAGAAGTGTGTGCTTGTAGACACTCAAGCTTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGTTTGGATCTCTGTGATGGCAGATATGATACTCCTGACCATAGGCTTTTTGACGATCTAGATACTGTCTTTGAAAATGATTTTCACAATCCTACATTTCCAACCAATTCGCACGGACCAAGAGAGCCATGGCATGACTTGCATTGCAGAGTTGAGGGTCCAGCTGCGTATGATATATTGACCAATTTTGAACAAAGATGGAAGAAAGCCAAAAAATGGCATGACTTCAGGCTCAAAAGGGTGACAAATTGGCATGATGATGCTTTGCTAAGCCTAGAGCGAATTTCATGGATTCTCACTCCATCTTCTGGTCCTGATGGTGATAAAGCTGTTCATGTAACTAATGAGGATGATCCTGAGAGCTGGCATGTGCAGGTATTTCGGTCAATAGATTCAGGATCGATGAAGGGTTTTCCAAAGGATGTTCAAGAAGCAAAGGCTCAGAATCTTTTCTGTGGAAAGAATTTGAAAGTAGATAAAAGCATCCATGCTGCTTATGTGAAAGCAATAAGATCAGCTCAAAACTTTATATACATTGAGAATCAGTATTTTCTAGGATCCTCATATCACTGGTCTTCACACAAAAATGCAGGTGCAAATCACTTGATTCCCACGGAATTGGCTTTAAAAATTGCCAACAAAATCAGTGCCAATGAACGTTTTTCTGTGTATATAGTTATACCAATGTGGCCAGAGGGGGTTCCCACTAGTGCTTCTGTTCAAGAAATTTTGTTCTGGCAGGGACAGACTATGTCTATGATGTACAAAATTGTTGCTGATGCACTTAAAAAGGCAGGTCTTTCTAGTGAGTATCATCCACAAGATTATCTCAACTTTTACTGTCTTGGAAAGCGCGAACCTCAATCCTCAGAAAGTCCATTAACACCACCATTTCACCCATTGGAAAACCGTGGTTTGGTATATATGCTAAACTACCCTTCTGTATTGTTACATGTTCTTAGCATTTTGTCATTCGGACTGTCATCATGCCTTGTGCCTCTGACGGTGTTGGATGATCCGGATCTACCACATGTTTCCGTTAAAAAGTCCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGAATACGTAATCATGGGATCTGCAAATATTAACCAGAGATCCTTGGATGGTTCAAGAGACACAGAAATAGCTATCGGTGCTTATCAGCCAAAGTATACATGGAAAGAAAAGAATTCTCGTCCATATGGCCAGGTATATGGTTACCGAATGTCTCTATGGGCTGAGCACCTTGGCAGTCTTGATGAAACTTTTGTAGAACCACACAGCCTAGAATGTGTTAGATATGTCAACAACATAGCCAGACAAAACTGGGACGTCTATATATCTGAGGAAGGGAAGGAGATGAGGGGACATTTGCTGCCGTATCCAATTCAGGTCAGCCAAGATGGAAAAGTTAGTCCATTGCCAGAGTACGAATACTTTCCAGATGTTGGTGGTAAAGTTCTTGGTTCACCCAATTCTCTTCCGGATGCATTAACCACATGA 2496 0.4227 MDSEGHIPPKPPCCKGSENEEAVFLHGDLDLWILEAKSLPNLDFPTEAVRKYFTMGNSRSGLKKYSGKYKMITSDPYVSVCLAGATVAQTRVISNCENPLWDEHFLVPVAHPARKLEFLVKDDDILGAQLIGVVDISVNKILSGNFINDWFPIIGHYVSYLRPYPELHVYVQFRPVTVGVTPPFPESEDYEDLAVPNTYFPVRKGGSVTLYQDAHVPDDDKLPEIPLEGGKLFQHGKCWEEICHAISEAHHLIYIIGWSVYHPVKLIREPTKPLPSGGDLSLGELLKYKSQEGVVGTLFTHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPDHRLFDDLDTVFENDFHNPTFPTNSHGPREPWHDLHCRVEGPAAYDILTNFEQRWKKAKKWHDFRLKRVTNWHDDALLSLERISWILTPSSGPDGDKAVHVTNEDDPESWHVQVFRSIDSGSMKGFPKDVQEAKAQNLFCGKNLKVDKSIHAAYVKAIRSAQNFIYIENQYFLGSSYHWSSHKNAGANHLIPTELALKIANKISANERFSVYIVIPMWPEGVPTSASVQEILFWQGQTMSMMYKIVADALKKAGLSSEYHPQDYLNFYCLGKREPQSSESPLTPPFHPLENRGLVYMLNYPSVLLHVLSILSFGLSSCLVPLTVLDDPDLPHVSVKKSRRFMIYVHAKGMIVDDEYVIMGSANINQRSLDGSRDTEIAIGAYQPKYTWKEKNSRPYGQVYGYRMSLWAEHLGSLDETFVEPHSLECVRYVNNIARQNWDVYISEEGKEMRGHLLPYPIQVSQDGKVSPLPEYEYFPDVGGKVLGSPNSLPDALTT 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00095 831 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 297 332 IPR001736 GO:0003824
Sebi124g00095 831 Pfam Phospholipase D C terminal 751 821 IPR024632 -
Sebi124g00095 831 ProSiteProfiles C2 domain profile. 8 151 IPR000008 -
Sebi124g00095 831 Pfam C2 domain 27 153 IPR000008 -
Sebi124g00095 831 SMART C2_3c 28 150 IPR000008 -
Sebi124g00095 831 Gene3D C2 domain 23 173 IPR035892 -
Sebi124g00095 831 Pfam Phospholipase D Active site motif 298 332 IPR001736 GO:0003824
Sebi124g00095 831 Gene3D Endonuclease Chain A 265 412 - -
Sebi124g00095 831 CDD C2_plant_PLD 22 174 - -
Sebi124g00095 831 SUPERFAMILY Phospholipase D/nuclease 201 400 - -
Sebi124g00095 831 Gene3D Endonuclease Chain A 449 617 - -
Sebi124g00095 831 SMART pld_4 677 704 IPR001736 GO:0003824
Sebi124g00095 831 SMART pld_4 297 332 IPR001736 GO:0003824
Sebi124g00095 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 176 IPR035892 -
Sebi124g00095 831 Gene3D Endonuclease Chain A 662 744 - -
Sebi124g00095 831 PANTHER PHOSPHOLIPASE D 295 820 IPR015679 -
Sebi124g00095 831 PIRSF PLD_plant 14 295 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi124g00095 831 PIRSF PLD_plant 294 628 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi124g00095 831 PIRSF PLD_plant 659 831 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi124g00095 831 SUPERFAMILY Phospholipase D/nuclease 467 762 - -
Sebi124g00095 831 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 677 704 IPR001736 GO:0003824
Sebi124g00095 831 Pfam PLD-like domain 676 715 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00095 Sebi-Chr124 1097517 1102974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00095 12 830 Phospholipase D Gene Family (Wang group) AT4G11850 48.471 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00095 K01115 - tcc:18607832 995.342