Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00075 ATGGAGAAACGAATTGTGACACAGTTAATGACTTGTATGGATCAATCAAACAGCCTTCTGCAACCAGCTGATGCATCAGAGGGTTCTGATGGTCCTCCTGGCTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGTCGATTTGATCGAGAGATTATCGTTGGCATTCCTGATGAATCTTCCAGGGAGGAGATCCTTTCTGTGCTCACTCTCAATCTTAAACTTGAGGGATCTTTTGATCTACGAAAAATAGCCAGGGCAACGCCAGGATTTGTTGGTGCTGATTTGGCTGCTCTGGCTAACAAGGCTGAAATGGATAAGCTTTCCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAAATGGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTACCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGATCTTTTAAGACAAGAGTTTGAACGTTATATTGTAAGGCGTATAAAATATCCTGAGGATTATGAGGGGTTTGGGGTGGATCTTGAGACAGGATTTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTGATGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGTGAGCTTGGAGTTCGGACCTTGTTTAGTCGTGCAAGGACATGCGCACCTTGTATACTTTTCTTTGATGAGGTGGATGCTTTAACAACTAAACGTGGTAAAGAAGGTGGATGGGTTATAACGATTATTGAACCAGAGCAGCGGAGAGGTGTTTTTGTGATTGGTGCAACAAATAGGCCGGAAGTAATGGATCGAGCTGTCCTACGGCCTGGCAGGTTTGGTAAACTTCTTTTTGTTCCTCTTCCAAGCCCAGAGGATCGAGTTTTGATATTAAAAGCTCTTGCAAGGAATAAACCTGTTGATACCAGTGTGGATTTGAACGCCATAGGAAGATCAGAGGCTTGCGAAAACCTGAGTGGCGCTGATCTTGCTGCATTGATGAATGAAGCAGCAATGGCTGCTCTTGAAGAGAAGTTGACCTCAACTGAGACAACTTGTGGTACATTTACCATAAAAACAAATCATTTTGAAGTGGCACTGAGTAAAGTCTCTCCCTCTGTGTCAGACATGCAAAAGCAGTACTATAAGCATTTGTCAGAGAGCTTTAAAGCAGCATGA 1203 0.4331 MEKRIVTQLMTCMDQSNSLLQPADASEGSDGPPGYVLVIGATNRPDAVDPALRRPGRFDREIIVGIPDESSREEILSVLTLNLKLEGSFDLRKIARATPGFVGADLAALANKAEMDKLSIKMSDFEEAVKMVQPSSRREGFSTIPNVKWEDVGGLDLLRQEFERYIVRRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLMPKLLPMRQELISFILSELGVRTLFSRARTCAPCILFFDEVDALTTKRGKEGGWVITIIEPEQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLFVPLPSPEDRVLILKALARNKPVDTSVDLNAIGRSEACENLSGADLAALMNEAAMAALEEKLTSTETTCGTFTIKTNHFEVALSKVSPSVSDMQKQYYKHLSESFKAA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00075 400 Gene3D - 67 140 - -
Sebi124g00075 400 PANTHER AAA-FAMILY ATPASE 1 398 - -
Sebi124g00075 400 SMART AAA_5 183 298 IPR003593 GO:0016887
Sebi124g00075 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 396 IPR027417 -
Sebi124g00075 400 Pfam AAA+ lid domain 318 356 IPR041569 -
Sebi124g00075 400 Pfam AAA+ lid domain 89 115 IPR041569 -
Sebi124g00075 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 139 IPR027417 -
Sebi124g00075 400 ProSitePatterns AAA-protein family signature. 36 54 IPR003960 GO:0005524|GO:0016887
Sebi124g00075 400 ProSitePatterns AAA-protein family signature. 266 284 IPR003960 GO:0005524|GO:0016887
Sebi124g00075 400 Gene3D - 141 296 IPR027417 -
Sebi124g00075 400 Gene3D - 1 65 IPR027417 -
Sebi124g00075 400 Gene3D - 297 387 - -
Sebi124g00075 400 Pfam ATPase family associated with various cellular activities (AAA) 2 64 IPR003959 GO:0005524|GO:0016887
Sebi124g00075 400 Pfam ATPase family associated with various cellular activities (AAA) 188 295 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00075 Sebi-Chr124 819264 822342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00075 118 398 Calmodulin-binding Proteins AT3G56690 36.066 2.85e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00075 K14571 - gmx:100809594 594.349