Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi124g00075 | ATGGAGAAACGAATTGTGACACAGTTAATGACTTGTATGGATCAATCAAACAGCCTTCTGCAACCAGCTGATGCATCAGAGGGTTCTGATGGTCCTCCTGGCTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGTCGATTTGATCGAGAGATTATCGTTGGCATTCCTGATGAATCTTCCAGGGAGGAGATCCTTTCTGTGCTCACTCTCAATCTTAAACTTGAGGGATCTTTTGATCTACGAAAAATAGCCAGGGCAACGCCAGGATTTGTTGGTGCTGATTTGGCTGCTCTGGCTAACAAGGCTGAAATGGATAAGCTTTCCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAAATGGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTACCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGATCTTTTAAGACAAGAGTTTGAACGTTATATTGTAAGGCGTATAAAATATCCTGAGGATTATGAGGGGTTTGGGGTGGATCTTGAGACAGGATTTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTGATGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGTGAGCTTGGAGTTCGGACCTTGTTTAGTCGTGCAAGGACATGCGCACCTTGTATACTTTTCTTTGATGAGGTGGATGCTTTAACAACTAAACGTGGTAAAGAAGGTGGATGGGTTATAACGATTATTGAACCAGAGCAGCGGAGAGGTGTTTTTGTGATTGGTGCAACAAATAGGCCGGAAGTAATGGATCGAGCTGTCCTACGGCCTGGCAGGTTTGGTAAACTTCTTTTTGTTCCTCTTCCAAGCCCAGAGGATCGAGTTTTGATATTAAAAGCTCTTGCAAGGAATAAACCTGTTGATACCAGTGTGGATTTGAACGCCATAGGAAGATCAGAGGCTTGCGAAAACCTGAGTGGCGCTGATCTTGCTGCATTGATGAATGAAGCAGCAATGGCTGCTCTTGAAGAGAAGTTGACCTCAACTGAGACAACTTGTGGTACATTTACCATAAAAACAAATCATTTTGAAGTGGCACTGAGTAAAGTCTCTCCCTCTGTGTCAGACATGCAAAAGCAGTACTATAAGCATTTGTCAGAGAGCTTTAAAGCAGCATGA | 1203 | 0.4331 | MEKRIVTQLMTCMDQSNSLLQPADASEGSDGPPGYVLVIGATNRPDAVDPALRRPGRFDREIIVGIPDESSREEILSVLTLNLKLEGSFDLRKIARATPGFVGADLAALANKAEMDKLSIKMSDFEEAVKMVQPSSRREGFSTIPNVKWEDVGGLDLLRQEFERYIVRRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLMPKLLPMRQELISFILSELGVRTLFSRARTCAPCILFFDEVDALTTKRGKEGGWVITIIEPEQRRGVFVIGATNRPEVMDRAVLRPGRFGKLLFVPLPSPEDRVLILKALARNKPVDTSVDLNAIGRSEACENLSGADLAALMNEAAMAALEEKLTSTETTCGTFTIKTNHFEVALSKVSPSVSDMQKQYYKHLSESFKAA | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi124g00075 | 400 | Gene3D | - | 67 | 140 | - | - | |
Sebi124g00075 | 400 | PANTHER | AAA-FAMILY ATPASE | 1 | 398 | - | - | |
Sebi124g00075 | 400 | SMART | AAA_5 | 183 | 298 | IPR003593 | GO:0016887 | |
Sebi124g00075 | 400 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 145 | 396 | IPR027417 | - | |
Sebi124g00075 | 400 | Pfam | AAA+ lid domain | 318 | 356 | IPR041569 | - | |
Sebi124g00075 | 400 | Pfam | AAA+ lid domain | 89 | 115 | IPR041569 | - | |
Sebi124g00075 | 400 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 5 | 139 | IPR027417 | - | |
Sebi124g00075 | 400 | ProSitePatterns | AAA-protein family signature. | 36 | 54 | IPR003960 | GO:0005524|GO:0016887 | |
Sebi124g00075 | 400 | ProSitePatterns | AAA-protein family signature. | 266 | 284 | IPR003960 | GO:0005524|GO:0016887 | |
Sebi124g00075 | 400 | Gene3D | - | 141 | 296 | IPR027417 | - | |
Sebi124g00075 | 400 | Gene3D | - | 1 | 65 | IPR027417 | - | |
Sebi124g00075 | 400 | Gene3D | - | 297 | 387 | - | - | |
Sebi124g00075 | 400 | Pfam | ATPase family associated with various cellular activities (AAA) | 2 | 64 | IPR003959 | GO:0005524|GO:0016887 | |
Sebi124g00075 | 400 | Pfam | ATPase family associated with various cellular activities (AAA) | 188 | 295 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi124g00075 | Sebi-Chr124 | 819264 | 822342 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi124g00075 | 118 | 398 | Calmodulin-binding Proteins | AT3G56690 | 36.066 | 2.85e-49 | 177 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi124g00075 | K14571 | - | gmx:100809594 | 594.349 |