Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00058 ATGAAAGTGAGGGCTGGTAGGGGCTTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTTCAGATAAAGTTGCAGGGACTATAGGGATTGCTGTTGATCACAGAAGGAAGAACCGTTCTTTGGAGAGTCTTCAGGCTAATGTTCAGAGGCTGAAGACATACAAGGCCAAGTTGGTTGTCTTCCCAAGGCGATCTCGTAAATTTAAGAATGGTGACTCTGCTCCAGAGGAGCTAGCTACAGCAACACAGGTCCAGGGTCTGTACATGCCCATTGTACGCGAGAGGCCATCTGTGGAGTTTACAAAAGTTACTGATGAGATGAAGTCATTCAAGGCATACTATAAACTGCGTCTAGAGAGGACGAACCAGCGTCACATGGGTGCAAGGTTGAAGAAAGCTGCCGAGGCTGAGAAGGAAGAGAAAAAGTAA 426 0.4695 MKVRAGRGFSLEELKAAGISDKVAGTIGIAVDHRRKNRSLESLQANVQRLKTYKAKLVVFPRRSRKFKNGDSAPEELATATQVQGLYMPIVRERPSVEFTKVTDEMKSFKAYYKLRLERTNQRHMGARLKKAAEAEKEEKK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00058 141 ProSitePatterns Ribosomal protein L13e signature. 4 18 IPR018256 GO:0003735|GO:0005840|GO:0006412
Sebi124g00058 141 Gene3D - 101 141 - -
Sebi124g00058 141 FunFam 60S ribosomal protein L13 100 141 - -
Sebi124g00058 141 PANTHER 60S RIBOSOMAL PROTEIN L13 1 141 IPR001380 GO:0003735|GO:0005840|GO:0006412
Sebi124g00058 141 Pfam Ribosomal protein L13e 1 119 IPR001380 GO:0003735|GO:0005840|GO:0006412
Sebi124g00058 141 Hamap 50S ribosomal protein L13e [rpl13e]. 1 62 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00058 Sebi-Chr124 671531 672600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00058 1 126 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 76.190 7.57e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00058 K02873 - mof:131156327 217.624