Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00046 ATGGAGGGTGAACGCAAACGTTTGAGTACGCCACGGCTTGATAGGCGAAACGCCATGAAGAACATCGATTACCAAGTGGAAGATGATGGGGCGATGAATAATATGCTGAACAAACGAGCTTCCGTCTTGGGAACAATCCCAAAAGGCTCGCTTTTCTTCTTTAATTCCCAACAACCTGAAAAGGATATGAATATCTCTGAGAACAGAGATGGGGGGATCAAGGGTGTTAGGCCTCCGGTTCTGGCAATTGTTGCTAGTGATGGTGATGTTGGTGAAAAGGCTTTTTCTGATATGGTTGAAGAGTACTCCAACTCCTCCATGGATGATGGTTCCTTTAGACAGATTTTCGGGTCATGGCAAAAGGGCCACATTTTAGGGAAAGGCTCCTTTGGAACTGTCTATGAAGGCTTCACTGATGATGGGATATTTTTTGCAGTAAAGGAAGTTTCTTTGCTGGATGATGGAAGCCAAGGCAAACAGAGCATTTTTCAACTTCAGCAGGAAATATGTCTTTTGAGCCAATTCAAACACGACAACATAGTTCGATATATCGGTACTGACAAGGACAATGACAAGCTGTATATCTTTCTTGAGCTTGTAACAAAAGGATCATTGGCAAGTCTCTATCAAAAATATCATTTAAAGGACTCTCAAGTTTCTGTATACACAAGACAAATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTCCACAGGGACATCAAGTGTGCCAATATACTGGTTGATGCAAATGGGTCTGTCAAGCTTGCAGATTTTGGGCTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAGGAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTAGATGTTGACCCGGCAACCTCCTTATTCTCATTGGAAGGAATGCAAGCGTTATTTAGGATTGGGAGGGGTCAACCTCCACCTGTTCCAGAATCTTTATCAAAAGATGCCCGAGATTTCATTCTTAACATAGGTTCTTCAGGTCACATTGCTTTTACTGCAGCCTTTTGA 1092 0.4249 MEGERKRLSTPRLDRRNAMKNIDYQVEDDGAMNNMLNKRASVLGTIPKGSLFFFNSQQPEKDMNISENRDGGIKGVRPPVLAIVASDGDVGEKAFSDMVEEYSNSSMDDGSFRQIFGSWQKGHILGKGSFGTVYEGFTDDGIFFAVKEVSLLDDGSQGKQSIFQLQQEICLLSQFKHDNIVRYIGTDKDNDKLYIFLELVTKGSLASLYQKYHLKDSQVSVYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLDVDPATSLFSLEGMQALFRIGRGQPPPVPESLSKDARDFILNIGSSGHIAFTAAF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00046 363 Pfam Protein kinase domain 120 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00046 363 Gene3D Transferase(Phosphotransferase) domain 1 118 354 - -
Sebi124g00046 363 SMART serkin_6 119 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00046 363 FunFam Mitogen-activated protein kinase 1, putative, expressed 117 355 - -
Sebi124g00046 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Sebi124g00046 363 ProSiteProfiles Protein kinase domain profile. 119 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi124g00046 363 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Sebi124g00046 363 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 98 349 - -
Sebi124g00046 363 SUPERFAMILY Protein kinase-like (PK-like) 115 349 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00046 Sebi-Chr124 567001 570373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00046 115 349 MAP Kinase Kinase Kinase AT4G08500 68.354 2.66e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi124g00046 Pkinase 1.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00046 - K13414 gmx:100806902 466.077