Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00038 ATGGCGAAGATGGCGAGAAGTAGGAATGAGGATCTGCGAGGAGAGTGTTCTCTTTCGGCTGATGAGGTTTGGAAGGAGATCGTCGCCGGCAGCACTGATCAACAGAATATCACAGTAACACTTGAGGATTTCCTCACCAAGCCTGTCACTGTCACAGACCAAGACACCATACTCCTCCCTCCTCAAACTCAAAGCAATGAGAAGAATGGGATTGTTGCTGTTGGAGGAAGAAAGAGGAGGGCGGTGGCTGTGGAGGAAAGCCTTGATAAGGCCACTCTTCAGAAACAGAGAAGAATGATAAAAAACAGAGAGTCTGCAGCTAGGTCCAGGGAACGCAAGCAGGCAGTCACTCACCTCCTTCTTTCCCTTTTTTTAAATAAATTTAACTTCAATTTCTACTTTTTTATTCTTTAA 414 0.4541 MAKMARSRNEDLRGECSLSADEVWKEIVAGSTDQQNITVTLEDFLTKPVTVTDQDTILLPPQTQSNEKNGIVAVGGRKRRAVAVEESLDKATLQKQRRMIKNRESAARSRERKQAVTHLLLSLFLNKFNFNFYFFIL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00038 137 Pfam bZIP transcription factor 91 118 IPR004827 GO:0003700|GO:0006355
Sebi124g00038 137 SUPERFAMILY Leucine zipper domain 95 121 IPR046347 GO:0003700|GO:0006355
Sebi124g00038 137 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 112 IPR004827 GO:0003700|GO:0006355
Sebi124g00038 137 Gene3D - 93 122 - -
Sebi124g00038 137 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 120 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00038 Sebi-Chr124 513962 514375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00038 19 115 bZIP Transcription Factor Family AT1G03970 40.000 5.55e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi124g00038 bZIP_1 1.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00038 K14432 - rvl:131308838 94.3597