Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00033 ATGGAGATGAAGAAGGGCATGTGGAATGTACTTGATGGGTTGAAACCAGTGTTGTTGATGGTTGGAGTGCAGATTGCATATGCTGCAGTTAATGTGTTCTATAAGCTCGCCATCAACGATGGAATGAGTGTTAAAGTAGCCACTGCCTATCGTCTCGGTTTTGGATCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGGAACAACAGACCAAAACTGACTTGGAGGGTGCTCTTCATGGCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTATTTCAAAACCTTTTCTACGAGGCACTGGCTTTAACATCAGCAACGTTTGTGTCCGCTATCTACAACCTCATTCCGGCCATCACCTTTATCTTGGCCATCTCCTGCGGATTGGAAAGATTAAATTTGAGGGCAGCAGCAGGAAAGGCCAAGGTGTTTGGAACTTTAATTGGAATCGGTGGGGCAATGTTGTTGACCTTTTTCAAAGGAGTAGAATTAGATATTTGGCCCTTCCACATCAACCTTTTGCATCCACATCACCAACACGTGGCACCACTCCATGCCCACTCTGCTAGCGCTCAATTGTTGGGTGTTCTCTGTTCCATAGGAAGCTGCTTCTCTTTTGCTCTCTGGTTTATAATTCAGGCTAAGATGATCAAAGAATATCCAAGCCATTACTCAAGCACTGCTTTGATGTCTACAATGGGAGCAATACAAGCCACTGCTTTTGGTCTTTGTGTTGAGAGAGATTTGAACCAATGGAAGCTGGGTTGGAATATCAGGCTACTAGCCGTGGCTTACTCGGGAATCGTGGCCTCTGGATTAGTGGTTATTGTGACTGCGTGGTGCATACGGATGAGGGGGCCTCTGTTTGTGTCTGTTTTCAACCCTCTAATGCTCGTGCTTGTGGCTGCTGCTGCTTCCTTCATGTTGGATGAGAACTTGTACTTAGGAAGTTTGCTTGGAGCGGTGCTGATTGTGTGTGGGCTGTATATGGTTCTATGGGGTAAGAGCAAAGAGATGAAAAAGATTGCTCAGTTAGTGCCATCAGAGATTACTAAAGAACCCGAAGCTATACAAGTTGTTGTTATGTCCACAGTGACACCACTAGATCATGATAAATGTCACCACAACAATCACAGCCAAACCAGGAATGTTCATGACGATTTGTCAAAACATGGGGAAGATGATATTCAAGTATAA 1197 0.4461 MEMKKGMWNVLDGLKPVLLMVGVQIAYAAVNVFYKLAINDGMSVKVATAYRLGFGSAFTVPLALISERNNRPKLTWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPAITFILAISCGLERLNLRAAAGKAKVFGTLIGIGGAMLLTFFKGVELDIWPFHINLLHPHHQHVAPLHAHSASAQLLGVLCSIGSCFSFALWFIIQAKMIKEYPSHYSSTALMSTMGAIQATAFGLCVERDLNQWKLGWNIRLLAVAYSGIVASGLVVIVTAWCIRMRGPLFVSVFNPLMLVLVAAAASFMLDENLYLGSLLGAVLIVCGLYMVLWGKSKEMKKIAQLVPSEITKEPEAIQVVVMSTVTPLDHDKCHHNNHSQTRNVHDDLSKHGEDDIQV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00033 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
Sebi124g00033 398 PANTHER WAT1-RELATED PROTEIN 15 347 IPR030184 GO:0016020|GO:0022857
Sebi124g00033 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Sebi124g00033 398 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Sebi124g00033 398 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Sebi124g00033 398 MobiDBLite consensus disorder prediction 372 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00033 Sebi-Chr124 455050 456723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00033 1 391 Nodulin-like Gene Family AT1G68170 42.711 6.41e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00033 - - gmx:100809587 616.305