Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00020 ATGGAGGTGAGGATTAAACATAGAGATGAGAGTGAGTATGAGGAGGACAGAGCAAGACTCACCATTTTGGAAGTATCCAACATGATGAGTGTCCCCATGTCCCTCATTGCAGTGATTAACCTCAAGGTCTCTGAGGCTATCTGGCAAGGTGGTTCCAACATTCCCCTCTCCGCCTCCCAGATTCTCCACCGCATTCGTCCCCACGGCGGTGGTGACGTTGACAACCTCCAACGCATCCTCCGCTTGCTCACCAGCTATGACATATTTGCAGAGCACCTGACTCCACAGAGTGGCGAAAGGAAATACTCCCTCACGTATATCGGCAAGACTCTGATTCCGGATAGCAATGGTCTATCCTACGGTGCTTACATGCTCCAACACCATCAGGAAGCGTTTATGAGAGCTTGGCCATTGGTGGGGGAGGCAGTAGAGGATCCAAAGATAGGGGCATTCAAGAAGGCGAATGGAGGAGAGGATGTGTTTCAATACTACGCCGACAGGGAAGATGCAATCAATTTATTTCATAAGGCCTTTTATGGAATGTCTGTACCCTTCATGACCAAAATGTTGGAAAACTATGACGGCTTTCAAGGGGTCCAAACACTCGTCGACGTTGGTGGCAACTCCGGTGTGTGCCTCCGTATGATCATGTCCAAATACCCAACTCTCCGAAAGGCTATTAACTATGATCTGCCCCATATGGTCGACTCTGCACAGCATATTCCAGGTGTAACCCACATTGCTGGTGACGCATTGGAGTACGTTCCCTGTGGTGATGCTATTTTTATGAAGTGGATATTTTTAAACTGGTCCGACGAGGAATGCAAGCAAGTGATGCATAATTGTTACGAGGCTCTTCCGGCTAATGGGAAATTGATCATTTGTGAACCGGTGCTGCCGGAGTTAACCGATGATAGTCAGAGAACAAGAACATTGCTAGGGGGTGATATATTCACAATGACCATGTACAGACCTAAGGGAAAGCACAGAACCGAAAAACAGTTCATAGAGATTGCCACTTTTGCTGGTTTCCCTCGCTTTCGTGCCCTGTATATTGACTCATACTTTGTTGTGTTTGAGTTTCAGAAATGA 1092 0.4725 MEVRIKHRDESEYEEDRARLTILEVSNMMSVPMSLIAVINLKVSEAIWQGGSNIPLSASQILHRIRPHGGGDVDNLQRILRLLTSYDIFAEHLTPQSGERKYSLTYIGKTLIPDSNGLSYGAYMLQHHQEAFMRAWPLVGEAVEDPKIGAFKKANGGEDVFQYYADREDAINLFHKAFYGMSVPFMTKMLENYDGFQGVQTLVDVGGNSGVCLRMIMSKYPTLRKAINYDLPHMVDSAQHIPGVTHIAGDALEYVPCGDAIFMKWIFLNWSDEECKQVMHNCYEALPANGKLIICEPVLPELTDDSQRTRTLLGGDIFTMTMYRPKGKHRTEKQFIEIATFAGFPRFRALYIDSYFVVFEFQK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00020 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 363 IPR016461 GO:0008168
Sebi124g00020 363 Gene3D - 3 111 IPR036388 -
Sebi124g00020 363 PANTHER O-METHYLTRANSFERASE 28 350 IPR016461 GO:0008168
Sebi124g00020 363 Pfam O-methyltransferase domain 140 344 IPR001077 GO:0008171
Sebi124g00020 363 SUPERFAMILY "Winged helix" DNA-binding domain 14 114 IPR036390 -
Sebi124g00020 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Sebi124g00020 363 Gene3D Vaccinia Virus protein VP39 113 363 IPR029063 -
Sebi124g00020 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00020 Sebi-Chr124 190171 194103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00020 9 363 Monolignol Biosynthesis Gene Families AT3G53140 58.217 3.62e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00020 - - ccaj:109819366 456.447