Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi124g00019 ATGGGAGATAGCAATTATGTGAACCTTCCACCGGGGTTTCGGTTTTATCCAACAGATGAAGAGCTTGTAGTCCATTTCCTTCACAGAAAGGCAGCATTCTTACCTTGCCACCCTGATGTCATCCCTGATCTTGAGCTCTACTCATTTGATCCATGGGAACTTGATGGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTGAGTGAGAATGGGTATTGGAAGGCAACGGGAATGGAAGAAGCAGTGGTTAGTAGCACAGGCAATAAGAGAGTTGGCATCAAGAAATATTTTGTCTTCCATTTGGGAGAACCCTCTTCTGCTATCAAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTGCATCTTCCTCTTCATCCAAAAGAAAGCCACACCCCAAAACAGATTATAGCAAATGGGTGATATGTCGTGTTTATGAGCGCAACGGGGATGGTGATGATGGAACAGAGCTGTCTTGTTTGGATGAAGTTTTCTTGGCATTGGATGATCTTGACGAAATAAGCTTACCAAATTAA 567 0.4286 MGDSNYVNLPPGFRFYPTDEELVVHFLHRKAAFLPCHPDVIPDLELYSFDPWELDGRALAEGKQWYYYSRRTQNRVSENGYWKATGMEEAVVSSTGNKRVGIKKYFVFHLGEPSSAIKTNWIMQEYRLSDSASSSSSKRKPHPKTDYSKWVICRVYERNGDGDDGTELSCLDEVFLALDDLDEISLPN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi124g00019 188 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Sebi124g00019 188 FunFam NAC domain-containing protein 104 18 161 - -
Sebi124g00019 188 Gene3D NAC domain 18 161 IPR036093 GO:0003677|GO:0006355
Sebi124g00019 188 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Sebi124g00019 188 PANTHER NAC TRANSCRIPTION FACTOR 56 9 162 - -
Sebi124g00019 188 Pfam No apical meristem (NAM) protein 10 128 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi124g00019 Sebi-Chr124 181357 182107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi124g00019 1 176 NAC Transcription Factor Family AT1G61110 41.538 1.06e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi124g00019 NAM 4.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi124g00019 - - gmx:100793989 323.553