Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00111 ATGAATGTAATGTTTTTGCCCCTCATCAATTTGGTAGAAAAACAGGTTGGAAATCATCTTGAGGGTGTTCCATTTTATGGCCCAAGGAGTGATTTTTCTGGCACTGAGATAAGTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCTAGAGATGCCTTCCAGTTGGTCCCTGACTCCTTTCAAAACTCACATTTGATGAAGGTGCTCAGGAATGCAGCTGGTGCAGAGAGGTCTAGAAGGCCCAATGATGATGAAGTGTTACTTGGTAGTATGCAGTCACTGAAGCCATCTTCTGCTTCTCAGATATTTCAGCCTCCAACCAGCACTAAGATTGATGCCAATAAATGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATACACCGCGTGGAGGGCAATTGGCACCTTTTGTACACCAAATGTCTTCAAACAAGATTAGGGATACCAATGCTGGTCCATCATATATCTCTCAGTCAGCTGCTGATGAAGGATCAAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATAAACACAACTGCTATTGCCACTGATAAAACTTCATCTGCAGTGCTTCTTGGTGGAAGCAGGCCAAAGCCTATAACTAATATAGTAGAATCATCCACACCTCCAAGTCAACATGGGTTAACATCTGCCAGCCGCCAGATGACTATTTTTTACGGAGGTCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTGATAATGGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCCACAGCATTCTCACCAAAATCTACTGTAAAGCTGGTTAATGATAGTAACTTGCACAGTGGAGAAAATGAAACAGGTGTAGTGAGTAATATGGCATTCCCACAGGAGCTTCATGGGAAATTGTCTATTACTGGCAGTTCTAGCCACGCCATCGGGCCTGGTGATCGAGTATCTACTCCAGCAG 988 0.4362 MNVMFLPLINLVEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQLVPDSFQNSHLMKVLRNAAGAERSRRPNDDEVLLGSMQSLKPSSASQIFQPPTSTKIDANKWERSILMNVGPSMQHTPRGGQLAPFVHQMSSNKIRDTNAGPSYISQSAADEGSRTGIKGPGILSSINTTAIATDKTSSAVLLGGSRPKPITNIVESSTPPSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSTVKLVNDSNLHSGENETGVVSNMAFPQELHGKLSITGSSSHAIGPGDRVSTPA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00111 329 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 32 288 IPR040390 -
Sebi123g00111 329 SMART tify_2 228 263 IPR010399 -
Sebi123g00111 329 Pfam tify domain 230 262 IPR010399 -
Sebi123g00111 329 ProSiteProfiles Tify domain profile. 228 263 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00111 Sebi-Chr123 1689209 1693000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00111 10 261 Tify Gene Family AT4G32570 41.085 7.43e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sebi123g00111 tify 1.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00111 - - gmx:100819293 552.747