Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00110 ATGTTGGGGAACAGGTATGAGAAAGATTTTCATTTAAAGCAATTGGGTTGGGTTGGGTTGCTCTTCTTGAAGGCAGGCACAATGAAAAAAGTAAATACATTTTGTGCCAAAGAAGAAGAGCGTCCACTTCGGATCACTAGAGCAAGGGCTAGAGCCTTGGGAGGGATTCCACCCTATTCAAGACCGTCCTTCAACAATGACCAGAAAAACTTGATTAGACCCAAAAGAGCAGCTTCTGAGAACAAATCTTCTTTGGTTGTTCCTGATGATGCTCTTCAGCATCATAAGAGAAGGGCAGTTCTTACAGATGTTACTAATATCTGCACAAAACCACATGATAAATGTATTAAAGCATCACAATTTCAGGCAAGAGGAGTTTACAAAAAGAAAGACACAAAGTTAGCTTCAGATGTCTCCATTGAAGTTTCATCATCACAACAGGATGTAAGAGCAAAGTTAACAGAAGAACTATCCACAATAAGGATGGTAGAGTCAAATGACACCATTGCTGCAGCAACTTTGCCTAACAAAGAGCCAGCAGAACATTGTATGTCCAACAGCATAAGAGAACATGTCATAGAAGATACCGCACGTTCAACACAAGAATCTGTGCAATTTGATGAACTCTTGATCTCTCCAAACAAAGATATAGATGTGATTTGTGAGAAGCTAGGAGCCTCAGATTGCCTGGCTATTGTGGACATAGATTCAGAGTTAAAGGATTCTCAAATTTGGAGTTCTTATGCCCCTGATATATACAACAAAAATCGAGTCACAGAGATTGAAAGGAAACCATTAACCAACTATATGGATAAGTTGCAGCAAGATATCACTCCAAACATGCGCGGAATTCTGATAGATTGGCTGGTGGAGGTTTCTGAGGAATATAATTTGGTTCCAGACACTCTTTACCTGACAGTGAACCTCATTGATCGGTTTCTCTCAACAAGTTTGGTTCAGAAACAAAGGCTCCAGTTGGTTGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAGGAATTTTGCTTCATCACAGATAACACATACACAAAAAAAGAGGTATTGAAAATGGAGAGTGAAGTTCTAAACCTCTTGCATTTTCAGTTATCTGTTCCCACAGCTAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCATCATACAAGGTTCCTCGTGTTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAGTACAGCTTCTTGCAGTTTCTACCTTCCCTAGTGGCTGCTTCTGCAGTGTTCCTTGCCAGATGGACCCTCAACCACTCAGAACATCCCTGGAATCCAACTCTGGAGCATTATACAAACTACAAAGCTTCACAGCTCAAAACTGTTGTTCTTGCCCTGGAAGATCTACAACTTAATACCAAAGGCTGTTCCCTGAATGCTATACGTGAGAAATATAAACAACAGAAGTTCAATTGTGTGGCAAAACTGTCTCCAAAACCGGTGAAGTCACTCTTCCAGGTTCAAGTACTCAGGAACAAGAACATCATGGCTATGTCTTTTGGGTTTTTCTCAACATCCACCCTAACCTTGAGGCCTCAACTTGCTATTCTACCTCCTCCTCCTTCTACGTTGCACGTGGTTGGAGCTGTGAACTCTCCCACCGTGTCTCAGCCATTCACCGACAAAATACGTGGTATTATGAAGCCTCGCAAAATCTCCCCCGAGATGCAAGACCTCGTCGGTGTTCCAGAGATTTCTTGA 1773 0.4168 MLGNRYEKDFHLKQLGWVGLLFLKAGTMKKVNTFCAKEEERPLRITRARARALGGIPPYSRPSFNNDQKNLIRPKRAASENKSSLVVPDDALQHHKRRAVLTDVTNICTKPHDKCIKASQFQARGVYKKKDTKLASDVSIEVSSSQQDVRAKLTEELSTIRMVESNDTIAAATLPNKEPAEHCMSNSIREHVIEDTARSTQESVQFDELLISPNKDIDVICEKLGASDCLAIVDIDSELKDSQIWSSYAPDIYNKNRVTEIERKPLTNYMDKLQQDITPNMRGILIDWLVEVSEEYNLVPDTLYLTVNLIDRFLSTSLVQKQRLQLVGVTCMLIASKYEEICAPRVEEFCFITDNTYTKKEVLKMESEVLNLLHFQLSVPTAKTFLRRFIQAAQSSYKVPRVELEFLANYLAELTLVEYSFLQFLPSLVAASAVFLARWTLNHSEHPWNPTLEHYTNYKASQLKTVVLALEDLQLNTKGCSLNAIREKYKQQKFNCVAKLSPKPVKSLFQVQVLRNKNIMAMSFGFFSTSTLTLRPQLAILPPPPSTLHVVGAVNSPTVSQPFTDKIRGIMKPRKISPEMQDLVGVPEIS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00110 590 CDD CYCLIN_AtCycA-like_rpt2 380 494 - -
Sebi123g00110 590 Gene3D - 265 378 - -
Sebi123g00110 590 PANTHER CYCLINS 202 495 IPR039361 -
Sebi123g00110 590 FunFam Cyclin A1 367 499 - -
Sebi123g00110 590 Pfam Cyclin, C-terminal domain 380 502 IPR004367 -
Sebi123g00110 590 SUPERFAMILY Cyclin-like 241 377 IPR036915 -
Sebi123g00110 590 ProSitePatterns Cyclins signature. 282 313 IPR006671 -
Sebi123g00110 590 Gene3D - 251 499 - -
Sebi123g00110 590 FunFam Mitotic cyclin 6 265 365 - -
Sebi123g00110 590 SMART cyclin_7 384 472 IPR013763 -
Sebi123g00110 590 SMART cyclin_7 287 371 IPR013763 -
Sebi123g00110 590 SMART Cyclin_C_2 380 503 IPR004367 -
Sebi123g00110 590 Pfam Cyclin, N-terminal domain 251 378 IPR006671 -
Sebi123g00110 590 CDD CYCLIN_AtCycA_like_rpt1 241 376 - -
Sebi123g00110 590 SUPERFAMILY Cyclin-like 379 502 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00110 Sebi-Chr123 1659361 1664537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00110 24 509 Core Cell Cycle Gene Families AT5G25380 50.909 5.26e-153 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00110 K06627 - gmx:547780 707.983