Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00102 ATGGGTGTGGATTACTATAATATATTGAAGGTGGATAGAAATGCTACCGAGGATGATTTGAAGAAAGCATACAGAAAATTGGCCATGAAATGGCACCCTGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAGCAGATCTCTGAGGCCTATGATGTATTGAGTGATCCTCAGAAAAGGGCAATTTATGATCAACATGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGATAGTGAACCATCAGGTGGGTTTAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTGGACCAGGCAAGTCCAAGAGATTTTCCTCTGATGGAGGGGGAGCTTTTAATGGATTTGGTGGAAATGAAAATATTTTTAGAACATATAGTGAACGTGGGAATATGCTAAAGAAGCCACCACCTGTTGAGACCAAATTGCCTTGCAGTTTGGAGGAGTTATATTCTGGATCTACAAGGAAAATGAAAATCTCAAGGACTGTAATAGATGCCAATGGAAGGCCAAGTCCAGAAACAGAGATATTAACCATTGAAGTGAAGCCAGGTTGGAAGAAAGGGACCAAGATAACATTCCCAGATAAAGGGAATCAGCAACCAAATCAACAGGCAGCAGACCTTGTATTTGTGATTGATGAGAAGCCTCATGATTTGTTCAAAAGAGATAGCAATGACCTCATTGTGAGCCAAAGGGTGTCACTAGCAGAGGCTATTGGAGGAACTTCAATAAATCTCAAAACACTTGATAACCGTAGTTTATGTATCCCAGTGACTGATATTGTGAGTCCTGGTTATGAGCTGGTTGTTGCAAATGAAGGGATGCCAATAACAAAAGAGCCTGGTCATAGGGGTGACTTGAGGATCATATTTGAGGTTAAGTTCCCTACAAGATTGACTTCAGAGCAAAGAGCAGGACTAAAGCGAGCATTGGGAGGAGGAGGAGCTTGA 996 0.4167 MGVDYYNILKVDRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYDVLSDPQKRAIYDQHGEEGLKDRPPPDSEPSGGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSKRFSSDGGGAFNGFGGNENIFRTYSERGNMLKKPPPVETKLPCSLEELYSGSTRKMKISRTVIDANGRPSPETEILTIEVKPGWKKGTKITFPDKGNQQPNQQAADLVFVIDEKPHDLFKRDSNDLIVSQRVSLAEAIGGTSINLKTLDNRSLCIPVTDIVSPGYELVVANEGMPITKEPGHRGDLRIIFEVKFPTRLTSEQRAGLKRALGGGGA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00102 331 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Sebi123g00102 331 FunFam DNAJ heat shock family protein 231 326 - -
Sebi123g00102 331 Gene3D - 152 230 - -
Sebi123g00102 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 233 IPR008971 GO:0006457|GO:0051082
Sebi123g00102 331 CDD DnaJ 4 59 IPR001623 -
Sebi123g00102 331 SUPERFAMILY Chaperone J-domain 3 110 IPR036869 -
Sebi123g00102 331 Pfam DnaJ domain 4 67 IPR001623 -
Sebi123g00102 331 FunFam DnaJ subfamily B member 13 3 111 - -
Sebi123g00102 331 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Sebi123g00102 331 PRINTS DnaJ domain signature 24 39 IPR001623 -
Sebi123g00102 331 PRINTS DnaJ domain signature 6 24 IPR001623 -
Sebi123g00102 331 PRINTS DnaJ domain signature 42 62 IPR001623 -
Sebi123g00102 331 PRINTS DnaJ domain signature 62 81 IPR001623 -
Sebi123g00102 331 Pfam DnaJ C terminal domain 153 311 IPR002939 -
Sebi123g00102 331 CDD DnaJ_C 151 314 - -
Sebi123g00102 331 Gene3D DnaJ domain 3 112 IPR036869 -
Sebi123g00102 331 FunFam Dnaj homolog subfamily b member 148 230 - -
Sebi123g00102 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 235 320 IPR008971 GO:0006457|GO:0051082
Sebi123g00102 331 Gene3D - 232 312 - -
Sebi123g00102 331 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 326 - -
Sebi123g00102 331 SMART dnaj_3 3 62 IPR001623 -
Sebi123g00102 331 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00102 Sebi-Chr123 1579107 1581001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00102 5 151 C2H2 Transcription Factor Family AT1G74250 32.680 1.50e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00102 K09510 - qsa:O6P43_019394 508.064