Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00093 ATGTCGCTGCCACCTCTTGTTAGAAGACGTTCAAGTGGCGAAATAAGGAACTTGACCACAGTTTCCAGCAGCCTCTTACCAGCATTTGGCACTACCACTGATGAACTGGCATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGCTAGCTTTCAGAGAAATGTCTATTGGGCCACTGTTGATTGCTGATCTCGTTGTAGATGTCTTCTTTGCTGTTGATATAGTCCTAACTTTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTCGTTGATAACCATAAGAAGATTGCTACTAGGTATGTCAAAAAGTTACACTTTGCCATGGATCTGGCCTCCACTGTGCCGTTTCAGCAGATATACCAAATTATAACAGGCAAACCACACAGAAACGAGTTCTTTGCTTTCCTAAATTTGCTTAGACTCTGGCGATTGAGGCGTGTTAGCCAACTCTTCTCAAGCTCTATCCGAACCATTGCCATGAGGGATGCCTTCAACAAAATGTTACAATATGCAAGCAAAAGTAGACTCCCAGAAGGTTTGAAGGAGCAAATGTTAGCACACTTACAGTTGAAGTTTAAGACGGCAGAGTTACAGCAAGAAGAAGTGCTACAGGGCCTGCCTAAAGCAATTAGATCCAGTATTGCTCAACATCTTTTCCACAACATAGTTGCAAATGCATATTTATTTAACGGAGTCTCTGATGATTTTGTCACCCAGCTGGTGTCAGAAATGAAAGCAGAATACTACCCATCTAAGGTTGACATCATCCTGCAAAATGAGGTGCCAGCATATTTCTACATTTTAGTCTCTGGATCAGTGTTATTGTTCAAACAAGAACCTGGAGACATGGTTGGAGAAATAGGCGTGATGTTGAATATTCCACAACCTTATACAGTGAGAAGTAGAAGGCTATCCCAGGTCATACGAATAAGTCATCAACATTTCAAGGAAAAGGTGCAGCCATTTACTGACGATGGGAAGGCAATCATCAGCAACTTTATTCAGGGCCTAAATGGCGAGGTGCTAGAAGAAATACCGTGTGTAACAGAATTGTTGGGTGACCTGCATGATGAGCATCTAACACAAAATGAGGGCACACACGATAATGTTTCGAGTTATCATGAAGATGATCCATATGAAGAAGGAAGAGCAGAAAATTCCAATCCAGTGTCAAGCCTAGTCCCCGTTAGAGTCAAAATCTACGGACATCATCCCAATGAAAACAAAATGGGAAACGGAACAACACCGAAGCTCATACTACTCCCAAATTCAGTAGAAGATCTTTTCAAAGTCGCAGAATTGAACATATTAAAGAAACAGAAAAGTACAATGACAAGATGA 1347 0.415 MSLPPLVRRRSSGEIRNLTTVSSSLLPAFGTTTDELALVVYSAWASPFELAFREMSIGPLLIADLVVDVFFAVDIVLTFFVAYLDKSTYFLVDNHKKIATRYVKKLHFAMDLASTVPFQQIYQIITGKPHRNEFFAFLNLLRLWRLRRVSQLFSSSIRTIAMRDAFNKMLQYASKSRLPEGLKEQMLAHLQLKFKTAELQQEEVLQGLPKAIRSSIAQHLFHNIVANAYLFNGVSDDFVTQLVSEMKAEYYPSKVDIILQNEVPAYFYILVSGSVLLFKQEPGDMVGEIGVMLNIPQPYTVRSRRLSQVIRISHQHFKEKVQPFTDDGKAIISNFIQGLNGEVLEEIPCVTELLGDLHDEHLTQNEGTHDNVSSYHEDDPYEEGRAENSNPVSSLVPVRVKIYGHHPNENKMGNGTTPKLILLPNSVEDLFKVAELNILKKQKSTMTR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00093 448 Gene3D Jelly Rolls 195 345 IPR014710 -
Sebi123g00093 448 Pfam Ion transport protein 36 157 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sebi123g00093 448 SMART cnmp_10 230 336 IPR000595 -
Sebi123g00093 448 FunFam Potassium channel KAT2 218 342 - -
Sebi123g00093 448 Pfam Cyclic nucleotide-binding domain 251 321 IPR000595 -
Sebi123g00093 448 SUPERFAMILY Voltage-gated potassium channels 36 158 - -
Sebi123g00093 448 SUPERFAMILY cAMP-binding domain-like 159 337 IPR018490 -
Sebi123g00093 448 CDD CAP_ED 230 332 IPR000595 -
Sebi123g00093 448 PANTHER POTASSIUM CHANNEL AKT1 158 347 IPR045319 GO:0005249|GO:0006813
Sebi123g00093 448 MobiDBLite consensus disorder prediction 363 390 - -
Sebi123g00093 448 Gene3D - 36 178 - -
Sebi123g00093 448 MobiDBLite consensus disorder prediction 363 385 - -
Sebi123g00093 448 ProSiteProfiles cAMP/cGMP binding motif profile. 230 338 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00093 Sebi-Chr123 1388842 1395684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00093 102 446 Ion Channels AT4G32650 44.086 7.22e-86 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00093 K21867 - gmx:100794620 407.142