Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00049 ATGGCGGTGGAACTCATGGGGTTCCCAAAAATGGACGAACAGAAGGCAATTCAAGAGGCTGCATCTGAAGGCTTAAAGGGAATGGAGCACCTCCCGCAGAGTTTGACTCTCGATTTCACAAAACCTAACATCTTGAACTCCAACGCTAAATCCTTGGAGCTTGAGTTCTCCAAGGAAACCTTCAGCGTTTCCTCTAACTCCTCCTTCATCTCCTCCGCCATCACCGGCGACGGCAGCGTTTCTAACGGCAAGCAAGGATCCTCCATCTTCCTCACACCTGCAGTCTCCGGCGGGAAGCCTCCACTCTCAACGCCGTCGTTCAAGAAAAGGTGTCACGAACACTCCGATGACGTCTCCGGGAAGCTCTCCGGCTCCAACAGCAAGTGCCACTGCACCAAGAAAAGGAAAAATAGGGTGAAAAAGACGATAAGAGTTCCGGCGATTAGTTCGAAGATCGCGGATATTCCGTCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGATCGCCGTACCCGAGGGGATATTATAAGTGCAGTACGGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGAGGGCCACGGACGATCCAGCGATGCTGATCGTAACGTATGAGGGGGAGCACCGTCATGTGATTCAAACCGCGATGCACGAGAACATTTCCGGGGCTGTTGGTTTGGTATTCGAGTCAACGTAA 708 0.5297 MAVELMGFPKMDEQKAIQEAASEGLKGMEHLPQSLTLDFTKPNILNSNAKSLELEFSKETFSVSSNSSFISSAITGDGSVSNGKQGSSIFLTPAVSGGKPPLSTPSFKKRCHEHSDDVSGKLSGSNSKCHCTKKRKNRVKKTIRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEGEHRHVIQTAMHENISGAVGLVFEST 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00049 235 FunFam WRKY transcription factor 65 140 217 - -
Sebi123g00049 235 Gene3D WRKY domain 145 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi123g00049 235 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 218 IPR044810 GO:0003700
Sebi123g00049 235 Pfam WRKY DNA -binding domain 158 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi123g00049 235 Pfam Plant zinc cluster domain 108 154 IPR018872 -
Sebi123g00049 235 MobiDBLite consensus disorder prediction 91 130 - -
Sebi123g00049 235 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi123g00049 235 ProSiteProfiles WRKY domain profile. 151 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi123g00049 235 SUPERFAMILY WRKY DNA-binding domain 154 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00049 Sebi-Chr123 591470 592975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00049 1 36 WRKY Transcription Factor Family AT2G24570 61.111 6.98e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi123g00049 WRKY 3.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00049 - - gmx:100127394 331.643