Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00037 ATGGGACTAAGTGGCACCATTAATGTTGACATCTTGCTGGAATTGTCCAATTTGAACAGCTTTAGTGTTATTAACAATAACTTTGAGGGCACAATGCCTGCATTCAAGAAGCTTCTGAGCTTAAGGGGATTGTTTCTGAGTAATAACAAATTCTCTGGTGGAATTCCTGATGATGCTTTTGAAGGCATGAGAAGGTTAAAGAGAGTTTTCTTGGCAGAAAATGGGTTCAGTGGTCATATTCCTACATCCCTTGCTCAATTGCCTAGACTTTTGGATGTAGACTTACATGGAAATAGTTTTGAAGGTAACATACCAGAATTTCAACAGAGAGATTTAAGAGTGTTTAATTTATCTAACAACCAATTAAAGGGTCCAATACCAGAAAGCTTAAGCAATGAGGATCCAGGCTCATTTGCAGGGAACAAAGGTCTATGCGGAAAACCTCTTAACAATTTCTGCAGCAGCAACCCACCCTTAAGTTGTCCACATGAAGAAAATGAACATAAGAAAAATAGGAACCTTATTACTATTATTGTAGTGGTGGTTGTGGCTGTCTTGGCCTTGATCCTAGCACTTGTCTTCATCCGTTCCTGTAGAAGAAAAACTACACAAACCGTTTTGGTTGAGGATGCACAAGTACAACAGTCTCAGTGGCAGTCTCAGAACACTAGTGCAGTTATTTCCAGTGAGGCCAAATCTATTGATGTGGCAGGTGCATCCATTAAGAAGGGTAATATAGATGGAGATTTGAACTTTGTTAGGAATAATGAAAAGGTGATGTTTGATTTGCAAGACTTGCTTAGGGCCTCAGCTGAGGTTTTGGGAAGTGGCAGCTTTGGATCCACATACAAGGCTATGCTTTTGAATGGACCAGTTGTGGTTGTTAAGAGGTTTAAACACATGAACAATGCAGGGAAAAAAGAGTTCTTTGAGCACATGAAAAGGCTTGGAAGATTGTCACATCCTAATGTACTCCCTCTTGTTGCATTCTATTATGGAAAAGAAGAGAAGCTTTTGGTTCATGAATTCGTTGAAAATGGCAGCTTGGCTAGTCATCTTCATGGTAGACGTGATTTTGAGTTGGACTGGCCAACTCGTTTGAAGATCATAAAAGGGGTAGCCAGGGGTTTAGCTTACCTTTACAAAGAATTCCCTGATCAAAACATACCACATGGCCATCTTAAATCCTCCAATGTTTTGCTAAACCATTCATTTGAGCCTCTTTTGGCAGAGTATGGACTTGCTGTAGTGATGGAGAAGAGGCATGCTCATCAGTTCATGGCAGCATACAAGTCCCCAGAGGTGAGCCAGTATGAGAAGCCTAGTGAGAAGAGTGATGTTTGGTGCTTGGGGATTCTCATATTGGAGATATTGACAGGGAAGTTTCCATCAAATTATCTAAGACATGGGAAGGAAGCAAGTGAAGAATTGGCAATGTGGGTGGACTCAATTGTGAGGGAAGGGTGGAGTGGGGAGGTGTTGGATAAGAGCATTTCAGGGAGAAGGAATGGGGAGGGTGAGATGTTGAAGCTGTTGAGGATTGGGATGGGTTGCTGTGAATGGGGTTTGGAGAATAGGTGGGATTGGAAGGAGGCAGTGGCCAAGATTGAGGAGTTGAAGGAGAGGGATTTTGAAGATGAAAGTGACTCATCCACTTTGAATCAACATGATGATGACTTGTCTTTCTCCCTCACTACTTGA 1701 0.418 MGLSGTINVDILLELSNLNSFSVINNNFEGTMPAFKKLLSLRGLFLSNNKFSGGIPDDAFEGMRRLKRVFLAENGFSGHIPTSLAQLPRLLDVDLHGNSFEGNIPEFQQRDLRVFNLSNNQLKGPIPESLSNEDPGSFAGNKGLCGKPLNNFCSSNPPLSCPHEENEHKKNRNLITIIVVVVVAVLALILALVFIRSCRRKTTQTVLVEDAQVQQSQWQSQNTSAVISSEAKSIDVAGASIKKGNIDGDLNFVRNNEKVMFDLQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNAGKKEFFEHMKRLGRLSHPNVLPLVAFYYGKEEKLLVHEFVENGSLASHLHGRRDFELDWPTRLKIIKGVARGLAYLYKEFPDQNIPHGHLKSSNVLLNHSFEPLLAEYGLAVVMEKRHAHQFMAAYKSPEVSQYEKPSEKSDVWCLGILILEILTGKFPSNYLRHGKEASEELAMWVDSIVREGWSGEVLDKSISGRRNGEGEMLKLLRIGMGCCEWGLENRWDWKEAVAKIEELKERDFEDESDSSTLNQHDDDLSFSLTT 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00037 566 SUPERFAMILY L domain-like 7 132 - -
Sebi123g00037 566 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Sebi123g00037 566 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Sebi123g00037 566 Gene3D Phosphorylase Kinase; domain 1 240 343 - -
Sebi123g00037 566 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 9 104 - -
Sebi123g00037 566 FunFam pollen receptor-like kinase 1 237 343 - -
Sebi123g00037 566 Gene3D Transferase(Phosphotransferase) domain 1 344 561 - -
Sebi123g00037 566 Pfam Leucine rich repeat 41 99 IPR001611 GO:0005515
Sebi123g00037 566 SUPERFAMILY Protein kinase-like (PK-like) 272 540 IPR011009 -
Sebi123g00037 566 MobiDBLite consensus disorder prediction 543 566 - -
Sebi123g00037 566 Pfam Protein kinase domain 271 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi123g00037 566 Gene3D Ribonuclease Inhibitor 110 156 IPR032675 -
Sebi123g00037 566 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 543 IPR046959 -
Sebi123g00037 566 ProSiteProfiles Protein kinase domain profile. 268 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi123g00037 566 FunFam Pollen receptor-like kinase 1 344 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00037 Sebi-Chr123 390048 392873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00037 3 561 Receptor kinase-like Gene Family AT5G35390 48.606 9.88e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi123g00037 Pkinase 7.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00037 - - gmx:100803999 803.127