Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi123g00015 ATGGCCACCGCCATCGTTGCAGTCGACCCCGACGGAAGCGGCGACGAGGGGTTGCTGACGCCAGGCGAAGGTGGTGGAGGCAAAGGCAACAGCAGAGACAGAGTAAAGGGTCCTTGGTCTCCGGAAGAGGACGCCATTCTGAGTCGCCTTGTAAGCAAGTTCGGCGCCAGAAACTGGAGCCTCATCGCTCGCGGGATCGCCGGAAGATCCGGCAAGTCCTGCAGGCTCCGGTGGTGCAATCAGCTCGATCCTTCCGTGAAGCGCAAGCCCTTCACTGGTGCGTAA 285 0.614 MATAIVAVDPDGSGDEGLLTPGEGGGGKGNSRDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTGA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi123g00015 94 Gene3D - 35 87 - -
Sebi123g00015 94 PANTHER MYB PROTEIN-RELATED 36 92 - -
Sebi123g00015 94 SUPERFAMILY Homeodomain-like 32 92 IPR009057 -
Sebi123g00015 94 FunFam MYB transcription factor 36 87 - -
Sebi123g00015 94 MobiDBLite consensus disorder prediction 1 39 - -
Sebi123g00015 94 SMART sant 35 84 IPR001005 -
Sebi123g00015 94 CDD SANT 38 80 IPR001005 -
Sebi123g00015 94 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 86 IPR017930 -
Sebi123g00015 94 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Sebi123g00015 94 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi123g00015 Sebi-Chr123 132909 133193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi123g00015 32 92 MYB Transcription Factor Family AT3G55730 78.689 2.65e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi123g00015 Myb_DNA-binding 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi123g00015 K09422 - pvu:PHAVU_010G075600g 138.272