Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1234g00001 ATGGATAAAAGTGGTGATGATCCAGTTGTTAAGTTAAATGATGATAAAGATCTTGGTTTTGATCATGTTGTTAGCTCTAATGATATTTGTAGTGAGCAACATAATGAAGTGGGTGATAAGAATGATCCTGGAGATGTTCATGTAACAGATGAGCAGGGTAATAGGATTAGTGGCTTGAAAGCTTATGATATACGGTCTCTACAGTTTGGTAGTGAGTTTGAAGCTTATGTATTTTACAGTGAATATGCTAGAGTCCATGGATTTGTTGTGAGGAGAGATGAAATAGGTCGAGATTCCAACGGGAACATGAATATGCGTCAATATGTTTGCAACAGAGAGGGATTGAGGAATAAAAAACACTTTTTAAGGGTAGATAGAAAAAAAGAGCATAAACCAATCACTCGTACCAATTGTCAAGCTAAGCTTCGGATACACTTAGATTACAAGACATCAAAATGGAAAGTGGTGTCCTTTGAGGAGTGTCATAACCATGACCCAACTCATCCCAAATTTGTGCACCTACAGCCCGCTTACCGTGGCATTAATGATGCAGATAAAGCCCAGAATTTTGATCAAATCTTGAGAGAACACAGAAACAATGAGTTGATTGTTGAATTTAAGTCTCTTTGTTCAGAACCTGTTATGACTACATCTCTTCAGAAGTTTGAGGTTGAGGCTTCAAAAATTTTCACACTTGAAATATTTAGAGAAGTGAGACAGGAGATTGAAGAGGTCGATGCATTAAGTGTTCTGGAGCGTGTAAAAAATGGAGATAAAGTGTCGTACAAGATGACTAAAGATAAAATATTCAGTCTCACTAAGAAGTTGGAAAATCAAGGGAATCGACGAGGTGCACATAGGTCGCCATCAAAGGCTATTATTGGTGATCCTACTATTGTCAAGACAAAGGATGCTCCAACAAAGAAAGGAATGGGAGGAAGAGAAGGCAATGATGAAGAAGGCACTCCGCATGTTGACAAGGATGAAGAAGGCACACCACATGTTGACAAGGTCATCCACCACAAATCACCTGCAGATCAGAGTGAAGCAGATAATGTTATTAAGGAGAAAGAAAAACATGTTCATGGCTCCCAAATGAAGGAAAACAAAAGAATCTGTTTGACAAAGAAATCAGTTAAAGGCACTGTAAGTAGTATTGTGATTTGTTTGCAAGATGAAGAAGGCACACCACATGTTGACAAGGTCATCCACCACAAATCACCTGCAGATCAGAGTGAAGCAGATAATGTTATTAAGGAGAAAGAAAAACCTGTTCATGGTTCCCAAATGAAGGAAAATAAAAGAATCTGTTCGACAAGAAATCAGTTAAAGGCACTGATGATGAAGAAGGCACTCCACATGTTGACAAGCAAATTCAAGGAGACAATCCTTCCTCTACTGGAACTAAGCGTGAAATTCATGAAGGCATCCAATCCACTCCTATTTCACATGGAGTTAAGCTTGACATCCCCCAATGTGTACAACCCACTCATTCCGGTGGAGTTCGACCTGAGATTCCCCAAGTTTTTCAACCAAGTCTTTATGGGGGTGTACGCCATGAAATTCCCCAAG 1572 0.3931 MDKSGDDPVVKLNDDKDLGFDHVVSSNDICSEQHNEVGDKNDPGDVHVTDEQGNRISGLKAYDIRSLQFGSEFEAYVFYSEYARVHGFVVRRDEIGRDSNGNMNMRQYVCNREGLRNKKHFLRVDRKKEHKPITRTNCQAKLRIHLDYKTSKWKVVSFEECHNHDPTHPKFVHLQPAYRGINDADKAQNFDQILREHRNNELIVEFKSLCSEPVMTTSLQKFEVEASKIFTLEIFREVRQEIEEVDALSVLERVKNGDKVSYKMTKDKIFSLTKKLENQGNRRGAHRSPSKAIIGDPTIVKTKDAPTKKGMGGREGNDEEGTPHVDKDEEGTPHVDKVIHHKSPADQSEADNVIKEKEKHVHGSQMKENKRICLTKKSVKGTVSSIVICLQDEEGTPHVDKVIHHKSPADQSEADNVIKEKEKPVHGSQMKENKRICSTRNQLKALMMKKALHMLTSKFKETILPLLELSVKFMKASNPLLFHMELSLTSPNVYNPLIPVEFDLRFPKFFNQVFMGVYAMKFPK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1234g00001 524 MobiDBLite consensus disorder prediction 302 335 - -
Sebi1234g00001 524 Pfam FAR1 DNA-binding domain 78 165 IPR004330 -
Sebi1234g00001 524 MobiDBLite consensus disorder prediction 307 335 - -
Sebi1234g00001 524 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1234g00001 Sebi-Chr1234 17764 21905 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi1234g00001 FAR1 4.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1234g00001 - - ccaj:109792835 189.504