Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00097 ATGGAACCTCGAGTTGGGAACAAGTTCCGTCTCGGCCGGAAGATTGGTAGCGGATCTTTCGGGGAGATCTATCTCGGTACCAATATTCAGACAAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAAACCAAGCACCCTCAATTGTTGTATGAATCCAGGCTGTATAAAATACTGCAAGGAGGAAATGGCATACCGAATGTGAAATGGTTTGGTGTTGAAGGAGAATACAATGTCCTTGTAATGGATTTACTGGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAGTCGGAAATTGTCGCTCAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTTGAATTTGTTCATTCCAAGTCATTTTTACATAGGGACATCAAGCCAGACAACTTTCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATATCATTGACTTTGGCCTTGCTAAGAAATACAGAGACACCTCTACACATCAGCATATTCCTTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGGTATGCCAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCACTTGGATATGTTCTTATGTATTTTTTAAGAGGGAGTCTGCCTTGGCAGGGATTGAAAGCAGGTACTAAGAAGCAGAAGTATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGCCGTGGCTATCCTTCAGAATTTGCATCATACTTCCATTATTGTCGGTCACTGAGGTTTGATGATAAACCAGATTATGCTTATTTGAAAAGACTTTTGCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGTCACTCCTCCTGCCCGTGCCATTGGTCCTGCTGCTGGACCGAGTTCTGGTATGCCGCCAGCTTCTGCAAACGCTGATGGACAGTCAGGAGGAGAAGGTGGTAGGCGTACTGGTTGGTCTTCATCAGATCCTACTCGTAGGAGAAACTCTGGACCTATTGCTAATGATGGAATATTATCTAGGCAAAAAGGCCCACTTATGAATGACTCAACTGGATCTAAAGATGTTATGTTGCCAAGTTCTACTTTCTTCCGACCTGGTGGATCTGCAAGGCGAGGTGCTGTTTCAAGCAGCCGTGATGCAGTTGTTGGCAGTGAGACTGAGACCTCTCGTGAGTCTCGTCCTCTCACCGTGGATCCAAATAAGGGAGCACTCCGTAAAATCTCTGGTGCTCAGAGAAGTTCACCTACCATGTCATCTGAGCACAACCGAGCATCCTCTGGCAGAAACACATCAAATACAAAGAACTTGGAGTCAACTCTTAGAGGTATTGAGAGCCTGCATTTCAATGACGAGAGGGTACAGTATTAG 1431 0.4298 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESRLYKILQGGNGIPNVKWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQIVTPPARAIGPAAGPSSGMPPASANADGQSGGEGGRRTGWSSSDPTRRRNSGPIANDGILSRQKGPLMNDSTGSKDVMLPSSTFFRPGGSARRGAVSSSRDAVVGSETETSRESRPLTVDPNKGALRKISGAQRSSPTMSSEHNRASSGRNTSNTKNLESTLRGIESLHFNDERVQY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00097 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sebi122g00097 476 CDD STKc_CK1_delta_epsilon 8 282 - -
Sebi122g00097 476 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Sebi122g00097 476 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Sebi122g00097 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Sebi122g00097 476 FunFam Putative Casein kinase I 1 85 - -
Sebi122g00097 476 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00097 476 MobiDBLite consensus disorder prediction 400 416 - -
Sebi122g00097 476 MobiDBLite consensus disorder prediction 364 378 - -
Sebi122g00097 476 MobiDBLite consensus disorder prediction 334 349 - -
Sebi122g00097 476 MobiDBLite consensus disorder prediction 306 458 - -
Sebi122g00097 476 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00097 476 PANTHER CASEIN KINASE-RELATED 9 422 - -
Sebi122g00097 476 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00097 476 FunFam Casein kinase I isoform delta-like 1 308 - -
Sebi122g00097 476 MobiDBLite consensus disorder prediction 428 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00097 Sebi-Chr122 1316756 1320823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00097 7 223 EF-hand Containing Proteins AT2G17890 26.222 1.37e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Sebi122g00097 Pkinase 2.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00097 K02218 - gmx:100819017 787.334