Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00092 ATGGGTGGAATAGGAAAGACAACCATAGCCAGAGATATGTTTGCCAAACACTTTGCACAATATGACAGTGTATGCTTCTTGGAAAAAGTAAGAGAAGAATCAGAGAAGTTGGGACCAACATCTGTGCGTAATAAGCTTCTCAACAATGCTGCACAATTAGAATACTTGTGTGGAGAGCTTGGTGACCTTGGACCACATAGTAGACTCATTATAACAACAAGAGATAGGCACACGCTTAGTACAAGAGTTGATGAGATTTATGAGGTCACCAAATGGAAGTTTTCAGAATCTCTAAAGCTTTTTAGCTTAGGAGCCTTCAACCAAAGCCATCCTAAAGAGGGTTATGAGCGTCTCTCAGAAAGAGCAGTAGCACATGCTGGAGGCATTCCATTAGCTTTAAAAGTTTTGGGTTTACATTTTAGATCCAGAAATATTAAATTCTGGGAATCTGAATTGAGTTATTTGGAGAACAAGGAGGAATCCTATGATGAAATTCGAGAAGTATTACAAGTGAGCTATAAAGGATTAACAAGGCGAGAGAAGGAAATATTTCTGGACATTGCATTCTTTTTCAAAGACGAAAATAAAGATTTCGTCATAAGGATACTTGATGCTTGTGGTTTCAATGCCACTAGTGGAATAGAAATCCTTCAAGATAAAGCTCTTGTAACTATTTCCAACAGAAATAGAATACAGATGCATGACTTACTGCAAAAAATGGCCTTCGATATAGTAAGGGAAGAATCTAGTAGAGACCCGAGAAAACGTAGTCGATTGAGGGACACTGAAGAAGTTCGTGATGTACTTAAAAACAACAAGGGTACCTTGAGTGGAATGGATACCCTTTTTAAGTCTCTTCCACCATCTTTTTATGCTAAGCTGCTTGTTGAGATTTGCTTGCCACATAGCAATGTTGAATATCTTTGGCACGGGAAGCAGGAACTTGTGAACTTAGAAGGAATCGACCTAAGTGAATGCAAACAGTTGATGAAGCTCCCTGATTTGTCTGGGGCGTCAAAACTTAAATGGTTGTATCTCTCCGGTTGTGAAAGTTTATGTGATGTTCAGCCATCTGTTTTTTCTAAGGACACACTTGTTACTCTGCTACTGGATAGGTGCAAAAAATTGGAAAGTCTTACAAGTGAGAAGCATTTAAGATCCCTGGAGAAGATCAATGTCTATGGCTGCTCAAGTCTCAAGGAATTTTCATTGTCCTCTGATTCAATTGAAAACTTGGATTTAAGCAATACAGGAATCGAAATATTGCACTCATCAATCGGTCATTTAGGTAAGCTTGAGTGGCTCAATCTTGAAGGTTTAAGATTACAGAATCTACCAAATGAATTGTCTCAGCTGAGTTCACTTACTGAGCTTTGGATTTCAAATTGCAGTATAGAAGCTTTGTTGTTTGCGGGAACTTCCTTTATACATCAAGAGTTTCATGCAGATAACTGCACCACATTGGTGACAGTATCCACTTTGAAGAGCTTTTCAAAAGTGATGAATGGAAAGGAGAAATGCCTTTCATTCAAGAATGACATGGAATTGGAAGGGCCCCTCACTCAACCGCATCATGGAAGATGGCATATTAACAATGAAGAGTGCTGCATTTCACAATATATTAGAAGCAGAGTTCCGAAGCAGCAATTCAGATACAGAACAACAAATTCCTCCATAACTATTGGACTTCCTCACCTTTCTTACTCGTTGGGGTTTATTTTCTCGGTCGTTGTTTCTCCATCCCTTGGAATGAAGAAGAAGGAGCATGATCTCCTTGGTGCTAAAATCCAATGTCAATGCTACTCAGAGGATGGCAAAAAGGTGGGACATGTGTCTACGTGGCATCATAAAACTGTTACAGATTTGAACTCGGACCATGTTTATGTATGCATGAAAGAGTGCGGGGTCCTCCCAATTTATTTCTCCGAATTTCGGAGCCTTGTAGGCACAATGAAGTTGGACAGTAGCTTAGTATGGGAGTTGACATATCAGTTGTCAGTGGAGTTGGGATCTGATTTGTATGAGGCAATGGAATTTGAGAAGGAAGGCAATGATGACATCGAATCAGTTGAAAGATGTGATGAGCACGAAGGCAATGACATCGAATCAAGTGAAAGGTCCATTGATGTACTTATGGAGATTAAACAGCAGTTAGAAGTGGATGTTGGTGGACTAACCATCGTGTAG 2187 0.3964 MGGIGKTTIARDMFAKHFAQYDSVCFLEKVREESEKLGPTSVRNKLLNNAAQLEYLCGELGDLGPHSRLIITTRDRHTLSTRVDEIYEVTKWKFSESLKLFSLGAFNQSHPKEGYERLSERAVAHAGGIPLALKVLGLHFRSRNIKFWESELSYLENKEESYDEIREVLQVSYKGLTRREKEIFLDIAFFFKDENKDFVIRILDACGFNATSGIEILQDKALVTISNRNRIQMHDLLQKMAFDIVREESSRDPRKRSRLRDTEEVRDVLKNNKGTLSGMDTLFKSLPPSFYAKLLVEICLPHSNVEYLWHGKQELVNLEGIDLSECKQLMKLPDLSGASKLKWLYLSGCESLCDVQPSVFSKDTLVTLLLDRCKKLESLTSEKHLRSLEKINVYGCSSLKEFSLSSDSIENLDLSNTGIEILHSSIGHLGKLEWLNLEGLRLQNLPNELSQLSSLTELWISNCSIEALLFAGTSFIHQEFHADNCTTLVTVSTLKSFSKVMNGKEKCLSFKNDMELEGPLTQPHHGRWHINNEECCISQYIRSRVPKQQFRYRTTNSSITIGLPHLSYSLGFIFSVVVSPSLGMKKKEHDLLGAKIQCQCYSEDGKKVGHVSTWHHKTVTDLNSDHVYVCMKECGVLPIYFSEFRSLVGTMKLDSSLVWELTYQLSVELGSDLYEAMEFEKEGNDDIESVERCDEHEGNDIESSERSIDVLMEIKQQLEVDVGGLTIV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00092 728 Gene3D Ribonuclease Inhibitor 211 517 IPR032675 -
Sebi122g00092 728 PRINTS Disease resistance protein signature 126 140 - -
Sebi122g00092 728 PRINTS Disease resistance protein signature 313 329 - -
Sebi122g00092 728 Gene3D - 93 177 IPR042197 -
Sebi122g00092 728 Pfam NB-ARC domain 60 174 IPR002182 GO:0043531
Sebi122g00092 728 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 49 IPR044974 GO:0006952
Sebi122g00092 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 187 IPR027417 -
Sebi122g00092 728 SUPERFAMILY L domain-like 227 475 - -
Sebi122g00092 728 Coils Coil 701 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00092 Sebi-Chr122 1280073 1283319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00092 273 502 WRKY Transcription Factor Family AT5G45050 27.801 9.78e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00092 - - mtr:11419903 598.201