Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00070 ATGGGAGGCATTGGTAAGACAACCCTTGCTGCTGCTGTTTTTCAGAAGGTCTCTTGTGAATATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGAATTAAAAAGGCATGGACTCAATTACATATGCAACAGACTTTTTTCTAAGTTACTAAGGGAAGATCTTGGTATTGACACTCCCATGGTAGTGCCCTCTAATGTGATGAGAAGACTCAGACGTATGAAAGCTTTCATTGTACTTGATGATGTGAATTCCTCAAAACTTCTAGAAAACTTGGGAACTGGTGCAGTTGAAGTCATATGGTTAGATATGACTCAAATTGCACCCATAAATTTAAGCTCCGAAGCATTTGAAATAATGCCAAACCTAAGGTTACTTGCTTTCCAAGGCATCAAATGGGACTCTAAGATAATTAACTCTGTGTACCTTCCAAAGGGTCTTAAATTATTGCCTAAAAACTTAAGATATTTTGAGTGGGATGGATATCCATCAAAGTCTCTGCCACCAACATTTTGTCCTGAGAAGCTTGTTGAGCTCTCCCTGCCATACAACAATGTGGAAAAACTTTGGGATGGAATACAGAAGCTTGAAGTTTTAAGTGTGAGTGGATGCACATCACTTAAGAGCCTTTGCAGTAACTCTTGTTCACCGTCTCTCCGAGAATTGTATGCTGCACGTTGCCCCAATCTCCAAGAGTTCTCAATCACATTAATGCCTCAAGATCCTTCCACAACTCCTTTTTGTTTGAATTTAGGAGGCTCAGAACTCCCAGACAATATCTCTTCTTTATCATCATTAGAGTATTTAAGACTATATGATTGTACCATCATAAGCTTGCCTAAAACCATTGAGTATCTTCCACGACTTCAACATCTTGAAGTTGATGAGTGTAAAAAGCTTCAATCTATACCTGCACTTCCACAGTCAATTCAATGCTTCCATGCATGGAACTGTGAATCTCTTGAGGAAGTGTTAAGTTCAATGACAGAACCATCCATGAAACACGAGTGTACTTTTCTGTTCCCTAACTGTGTAAATTTGAATGAAGATTCATACCATGCCATTCTCAAAGATGCCACTGTTGGGATTGAACTTGGAGCAAAACCATTGTCAGAAGTAGTATTAGAAGATCATGAGGATGATGATGAAGAAACATATGCATTTGAAACAGTAAGGAGTGGTAAAGTTTGCTACTTTTTACCAGCTAGAAGTGACAAACTTCGAGAATTGTTTAGTTACCACTCTACACAAGCTCTATTCACTGTTGAACTACCCCCTAATCTGGTGGGTTTGGTTTTCTACTTGGTTCTTTCTCAAGTCCAATCATGCCACATTGGATATGGTGGAAGTTTTGGATGTGAATGCTGCTTGGAAACTAGTTGGGATGAAGAGATCAATATAACAAGTTTCTTTGTAGCTGAAAGCATCTGGTTCAATTATTATACATCATTTGAAATGATGTCAGATCATGTGTTTTTATGGTATGATGCAGAGTGTTGCAAGCAGATAATGGAAGCCATTAAAGAAAGTAGAAAAGTCATCAATCACAGGAGAGCCAGATACAAGGCAAAGATCACATTTGAATTCTTTGCTCAAAATATGGATAATGAGGAAGAAATAATAAAAGAGTGTGGGTTACGCTGGATATATCCCTCAGAAGATCAAATTGTGGAGAAGGGAGGAGGGTGTAAATCCAAGAGAAGTAGGGAAGATCATGAATTAGAAGCCAGTAAAATCCAAAATAGAGATGTGGGCTCTGAATCTGATAAACAAGAAGAAATGATTCCTCCAACAAAGAAACTAAAACAAATATTTGGAACTCCCTCCAATCTGGAATCAAATCAAGAAATGGAAGACTTGAGGTAA 1866 0.381 MGGIGKTTLAAAVFQKVSCEYEGSCFLENVTEELKRHGLNYICNRLFSKLLREDLGIDTPMVVPSNVMRRLRRMKAFIVLDDVNSSKLLENLGTGAVEVIWLDMTQIAPINLSSEAFEIMPNLRLLAFQGIKWDSKIINSVYLPKGLKLLPKNLRYFEWDGYPSKSLPPTFCPEKLVELSLPYNNVEKLWDGIQKLEVLSVSGCTSLKSLCSNSCSPSLRELYAARCPNLQEFSITLMPQDPSTTPFCLNLGGSELPDNISSLSSLEYLRLYDCTIISLPKTIEYLPRLQHLEVDECKKLQSIPALPQSIQCFHAWNCESLEEVLSSMTEPSMKHECTFLFPNCVNLNEDSYHAILKDATVGIELGAKPLSEVVLEDHEDDDEETYAFETVRSGKVCYFLPARSDKLRELFSYHSTQALFTVELPPNLVGLVFYLVLSQVQSCHIGYGGSFGCECCLETSWDEEINITSFFVAESIWFNYYTSFEMMSDHVFLWYDAECCKQIMEAIKESRKVINHRRARYKAKITFEFFAQNMDNEEEIIKECGLRWIYPSEDQIVEKGGGCKSKRSREDHELEASKIQNRDVGSESDKQEEMIPPTKKLKQIFGTPSNLESNQEMEDLR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00070 621 Pfam Leucine Rich Repeat 175 194 IPR011713 -
Sebi122g00070 621 SUPERFAMILY L domain-like 98 344 - -
Sebi122g00070 621 Gene3D Ribonuclease Inhibitor 247 349 IPR032675 -
Sebi122g00070 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 103 318 IPR044974 GO:0006952
Sebi122g00070 621 MobiDBLite consensus disorder prediction 560 597 - -
Sebi122g00070 621 Gene3D Ribonuclease Inhibitor 101 241 IPR032675 -
Sebi122g00070 621 Gene3D - 1 100 IPR027417 -
Sebi122g00070 621 MobiDBLite consensus disorder prediction 560 621 - -
Sebi122g00070 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 106 IPR027417 -
Sebi122g00070 621 Pfam NB-ARC domain 1 94 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00070 Sebi-Chr122 1022187 1025329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00070 3 94 WRKY Transcription Factor Family AT4G12020 30.851 4.32e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00070 - - lja:Lj3g3v2692930.1 683.33