Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi122g00067 ATGCTCATAATTATCCTAAATAAAAATTATCTTGTAGCCACCAAACTGCTCCACTCCAGAGCCAGAAGCCATTTAAGTGTTGCATTCCCACCATCAGTGTCATCTTCTGAAGTTCCTTCAACTATTGCACACCCACCTGATGAGTCATCTTCCGGTGTTGCTGCAAGTATTGCATTTCCACCTTCAAAGTCAATTGACAAAGCTCCTACAAAGAAATGGACACATAGTTCTGTGGATTCTCCAATATCACATCATAAGCATCACTATTCCATAACAAAGAACCACAATCCAACTCCAGGGCCAACCTACCCAGTCCAGGCTCCTACTTACAGCCACCAAGGTCCTTCAGTCTTCAAATCACAACCTCCCTTCACTTCACCAAGGAGTAAGGATATCCATGCACCTGCACCTGCACCATCACCAGCATTTCTGTCAGGTCACCTGGATGTGCCCTCTCCTTCACCTAGAATTTCACCTCTAGGTTCATCATTGAAGAAGATGAAGACTCCACCACCAGCTTATACATTCGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGTCAATGACTTGCTCAGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCTGCATCAGTATTTCAATATACAAGTGCTTTCCTTTGGTTTCAGAGCTAGCTGAGGAAATTGCAGCAAGTGTTTTGCTGAACCATAGCCAAGTTCGCATTGTGGGAGCTGATGCAGCTAATCAGCAAGTAGAGAAAACCAATGTTCTCATAAACTTGGTACCTAAAGGAGTAAAATTTGATGATACAATGGCATTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTAATAGATGCTTCACTCTTTGGTGATTATGAAGTACTTTATGTTCATTATCCAGATCTTCTAGATTCATACTTTTGGACAACACATGCAGGTCTTCCACCATCTCCACCTTCAACTCCATCAGGTGCTTCTAGTATAGATGATGGGCCAAATCCTGGTCATGACAACAATGGAACGATAATGAAACCTTTAGGAGTAGATGTCTCAAAGAAGAAAAATGAAGGGACTAATGGAAGAATGATTTTTATAATTGTGCTGTCATCAATTACAGCTTTTGTTATATTCATTGGACTTGCTTGGCTGTGCTTGTTGAAATGCAGTTCCCGTGCTCATGAACATGAACAAGTTCCAGATAGTTTAATTTCATTCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTAACTCATGGGAGCATACCGGGTTCTGGATCAGGGTCATCTAATTCTGGAACAATAAAATATACAGGATCTGCTAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAAATTCGATTCTTCAAGAATATTAGGAGAAGGAGGCTTTGGACTTGTTTACAAAGGTATTCTAAATGATGGGAGAGATGTAGCAGTGAAGATTCTCAAAAGAGATGATCAGCGTGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGCCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACTCGTTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCTCACTTACATGCACTGGATGAGGGAAACAAGCACATCTCCACACATGTCATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTCGTCAAAAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAACTCCTAACTGGAAGAAAGCCAGTGGATTTATCACAACCACCAGGTCAAGAAAATCTTGTGACTTGGGTTCGTCCACTTCTCACAAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGGCCAACATATCTGTTGATACTGTGCTAAAAGTTGCAGCAATTGCATCCATGTGTGTTCAACCAGAAGTCTCTCAACGTCCTTTCATGGGTGAAGTCGTTCAGGCCTTGAAGCTGGTATGCAGTGAGTTTGAGGAAACAAACTATACTAGATCAAGGAGTTCTCAAGAAGAAGGTCTTGTAACTAATGTGGAAAGGAAGTTTTCAGATGAAAGAGTGGATTTTTCAGAGTATCAAAAAACCTTTTCTGGCTATCAATCTAGTGAAGAAAAGGTACAATTATCAGCATCAGACCTGCTCAGTACTTCAGGCCAGGAATTTGAATCATTCAGGAGGCATTCTACTTCAGGGCCTCTGACTATTGGGAAGAAAAAGCATTTCTGGCAAAAGTTGAAAGGTTTGTCTAGAGGTAGCACCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2370 0.4118 MLIIILNKNYLVATKLLHSRARSHLSVAFPPSVSSSEVPSTIAHPPDESSSGVAASIAFPPSKSIDKAPTKKWTHSSVDSPISHHKHHYSITKNHNPTPGPTYPVQAPTYSHQGPSVFKSQPPFTSPRSKDIHAPAPAPSPAFLSGHLDVPSPSPRISPLGSSLKKMKTPPPAYTFVLPPPPPNKDCLSMTCSEPLTYTPPGSPCGCVWPLQVKLCISISIYKCFPLVSELAEEIAASVLLNHSQVRIVGADAANQQVEKTNVLINLVPKGVKFDDTMAFLIYKKFWHREILIDASLFGDYEVLYVHYPDLLDSYFWTTHAGLPPSPPSTPSGASSIDDGPNPGHDNNGTIMKPLGVDVSKKKNEGTNGRMIFIIVLSSITAFVIFIGLAWLCLLKCSSRAHEHEQVPDSLISFSSKQSRAARSLTHGSIPGSGSGSSNSGTIKYTGSAKIFTLNDLEKATNKFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKANISVDTVLKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETNYTRSRSSQEEGLVTNVERKFSDERVDFSEYQKTFSGYQSSEEKVQLSASDLLSTSGQEFESFRRHSTSGPLTIGKKKHFWQKLKGLSRGSTSEHGFSTKLWPGSH 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi122g00067 789 FunFam receptor-like serine/threonine-protein kinase ALE2 437 539 - -
Sebi122g00067 789 Gene3D Phosphorylase Kinase; domain 1 437 539 - -
Sebi122g00067 789 MobiDBLite consensus disorder prediction 326 354 - -
Sebi122g00067 789 MobiDBLite consensus disorder prediction 68 86 - -
Sebi122g00067 789 ProSiteProfiles Protein kinase domain profile. 464 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi122g00067 789 Gene3D Transferase(Phosphotransferase) domain 1 543 700 - -
Sebi122g00067 789 PANTHER OS01G0750732 PROTEIN 179 549 - -
Sebi122g00067 789 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Sebi122g00067 789 MobiDBLite consensus disorder prediction 93 127 - -
Sebi122g00067 789 Pfam Protein tyrosine and serine/threonine kinase 565 673 IPR001245 GO:0004672|GO:0006468
Sebi122g00067 789 Pfam Protein tyrosine and serine/threonine kinase 467 554 IPR001245 GO:0004672|GO:0006468
Sebi122g00067 789 SUPERFAMILY Protein kinase-like (PK-like) 447 673 IPR011009 -
Sebi122g00067 789 MobiDBLite consensus disorder prediction 30 47 - -
Sebi122g00067 789 MobiDBLite consensus disorder prediction 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi122g00067 Sebi-Chr122 979905 983935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi122g00067 553 784 Receptor kinase-like Gene Family AT5G56890 60.169 2.36e-76 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi122g00067 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi122g00067 - - gmx:100814040 875.159